RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GNALP38405 381 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CBX5P45973 191 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SEPHS1P49903 392 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ARHGDIBP52566 201 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CEBPGP53567 150 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 MXD1Q05195 221 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SMCO1Q147U7 214 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 NDUFA9Q16795 377 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FAM110CQ1W6H9 321 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SH3PXD2AQ5TCZ1 1133 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SLC4A11Q8NBS3 891 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 MCFD2Q8NI22 146 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CPT1BQ92523 772 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 C11orf24Q96F05 449 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 CCDC177Q9NQR7 707 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 CTPS2Q9NRF8 586 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ING4Q9UNL4 249 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CTSOP43234 321 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 UBXN2BQ14CS0 331 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CARTPTQ16568 116 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ULK3Q6PHR2 472 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 C15orf52Q6ZUT6 534 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 MREGQ8N565 214 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 MCCC1Q96RQ3 725 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 MBD2Q9UBB5 411 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FUT4P22083 530 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 IL12BP29460 328 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 TM4SF1P30408 202 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 POU5F1Q01860 360 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 ENPEPQ07075 957 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CHIT1Q13231 466 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 C2orf27AQ580R0 203 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ZNF781Q8N8C0 355 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 C4orf32Q8N8J7 132 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 OR10A6Q8NH74 314 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 GIPC3Q8TF64 312 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SNX33Q8WV41 574 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FRMD6Q96NE9 622 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 KCNS3Q9BQ31 491 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ZNF541Q9H0D2 1346 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 A0A0G2JN53 185 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 OR4F21O95013 312 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 TPSB2P20231 275 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 AHCYP23526 432 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CCR10P46092 362 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ASMTP46597 345 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ARFIP1P53367 373 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 TPSAB1Q15661 275 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SMU1Q2TAY7 513 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ATP13A5Q4VNC0 1218 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 DCST1Q5T197 706 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 GDF6Q6KF10 455 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 RBM15BQ8NDT2 890 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 TESMINQ9Y4I5 508 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ARHGEF33A8MVX0 844 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 PRNPP04156 253 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 KLF1Q13351 362 aaPredicted RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 HKDC1Q2TB90 917 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 ZDHHC20Q5W0Z9 365 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 FSTL4Q6MZW2 842 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 ZYG11AQ6WRX3 759 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 TMPRSS11AQ6ZMR5 421 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 FAM156AQ8NDB6 213 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 OR2T34Q8NGX1 318 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 OR2T3Q8NH03 318 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 INPP4AQ96PE3 977 aaPredicted RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 OR51V1Q9H2C8 321 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 STXBP5LQ9Y2K9 1186 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 UGT2B11O75310 529 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 FABP3P05413 133 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 ACAP2Q15057 778 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 PITRM1Q5JRX3 1037 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 UBAP2Q5T6F2 1119 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 TAC4Q86UU9 113 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 CDH22Q9UJ99 828 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 PRMT3O60678 531 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 MYCLP1P12525 358 aaPredicted RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 DDX6P26196 483 aaKnown RBP eCLIP10.84□□□□□ -0.679e-6■■■■□ 22.9
VAPB-204ENST00000475243 SCLYQ96I15 445 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 MTERF1Q99551 399 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 TCAF1Q9Y4C2 921 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 NOL4O94818 638 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 POP4O95707 220 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 ALOX5P09917 674 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 CDH4P55283 916 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 ZNF662Q6ZS27 426 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 AHSA2Q719I0 299 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 UBE2J2Q8N2K1 259 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 HPS1Q92902 700 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 ZNF570Q96NI8 536 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 COPS4Q9BT78 406 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 A0A1B0GVM2 712 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 TCAF2A6NFQ2 919 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 AREL1O15033 823 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 UROSP10746 265 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 CCNCP24863 283 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 RPL5P46777 297 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms