RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PPP1R21Q6ZMI0 780 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 TMEM26Q6ZUK4 368 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 LINC00523Q86TU6 105 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 RBM12BQ8IXT5 1001 aaKnown RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 DNAAF3Q8N9W5 541 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 MAGOHBQ96A72 148 aaKnown RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 EID2BQ96D98 161 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 ETNK1Q9HBU6 452 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 POT1Q9NUX5 634 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 FEZ2Q9UHY8 353 aaPredicted RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 PIEZO2Q9H5I5 2752 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 A6NCN8 305 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 CHUKO15111 745 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 CAPN5O15484 640 aaPredicted RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 PPFIA2O75334 1257 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 AP2A1O95782 977 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 ZSCAN5DPP0CG00 497 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 LIFP15018 202 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 XRCC1P18887 633 aaPredicted RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 LPOP22079 712 aaPredicted RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 MAP4P27816 1152 aaKnown RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 PBLDP30039 288 aaPredicted RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 UBE2IP63279 158 aaKnown RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 PDE1BQ01064 536 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 MC2RQ01718 297 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 TMEM115Q12893 351 aaPredicted RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 TAF1AQ15573 450 aaPredicted RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 TBR1Q16650 682 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 IRGCQ6NXR0 463 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 C4orf22Q6V702 233 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 PRUNE1Q86TP1 453 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 AMZ2Q86W34 360 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 RASGRP3Q8IV61 690 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 RASGEF1CQ8N431 466 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 TTC30BQ8N4P2 665 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 COG1Q8WTW3 980 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 ZDHHC12Q96GR4 267 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 ULBP3Q9BZM4 244 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 TRIT1Q9H3H1 467 aaKnown RBP14.85□□□□□ -0.03
VARS-223ENST00000474643 UCK1Q9HA47 277 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 SLC23A2Q9UGH3 650 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 ARL5AQ9Y689 179 aa14.85□□□□□ -0.03
VARS-223ENST00000474643 CFAP46Q8IYW2 2715 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 OR52A4PA6NMU1 304 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
VARS-223ENST00000474643 ESPNB1AK53 854 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 STK17BO94768 372 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 APRTP07741 180 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 PRKAR1AP10644 381 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 TPH1P17752 444 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 MSH3P20585 1137 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 CASQ1P31415 396 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 RPL22P35268 128 aaKnown RBP14.84□□□□□ -0.03
VARS-223ENST00000474643 ARL4DP49703 201 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
VARS-223ENST00000474643 KLHL35Q6PF15 583 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 ARHGAP22Q7Z5H3 698 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 C17orf53Q8N3J3 647 aaPredicted RBP14.84□□□□□ -0.03
VARS-223ENST00000474643 PRELID2Q8N945 189 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 ACTRT1Q8TDG2 376 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 C9orf72Q96LT7 481 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 CATSPER2Q96P56 530 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 FBXO8Q9NRD0 319 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 PIH1D1Q9NWS0 290 aaKnown RBP14.84□□□□□ -0.03
VARS-223ENST00000474643 SMARCAL1Q9NZC9 954 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 IL17CQ9P0M4 197 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 PDP2Q9P2J9 529 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 FAM8A1Q9UBU6 413 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 SAR1BQ9Y6B6 198 aa14.84□□□□□ -0.03
VARS-223ENST00000474643 HELZ2Q9BYK8 2649 aaKnown RBP14.83□□□□□ -0.03
VARS-223ENST00000474643 OR2AG2A6NM03 316 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 ZNF185O15231 689 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 KCNJ13O60928 360 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 RALBP11234 206 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 SLC19A1P41440 591 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 CCR10P46092 362 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 VPS41P49754 854 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 TERF1P54274 439 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 GFERP55789 205 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 TMPRSS15P98073 1019 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 MC1RQ01726 317 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 KRT33BQ14525 404 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 POU6F1Q14863 301 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 TRIP13Q15645 432 aaPredicted RBP14.83□□□□□ -0.04
VARS-223ENST00000474643 CHRNA6Q15825 494 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 AGAP9Q5VTM2 703 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 CACHD1Q5VU97 1274 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 KCTD11Q693B1 232 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 FAM92BQ6ZTR7 304 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 DET1Q7L5Y6 550 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 ESX1Q8N693 406 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 GLIS1Q8NBF1 620 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 OR4K2Q8NGD2 314 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 OR52K1Q8NGK4 314 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 STAMBPL1Q96FJ0 436 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 DCUN1D1Q96GG9 259 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 ELMO2Q96JJ3 720 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 CAPZA3Q96KX2 299 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 ARNT2Q9HBZ2 717 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 APMAPQ9HDC9 416 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms