RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 AP2M1Q96CW1 435 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 IGSF21Q96ID5 467 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TWNKQ96RR1 684 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CPPED1Q9BRF8 314 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 C11orf84Q9BUA3 381 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ACE2Q9BYF1 805 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 PIGUQ9H490 435 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MYOZ1Q9NP98 299 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 OLFML3Q9NRN5 406 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PARPBPQ9NWS1 579 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MPP6Q9NZW5 540 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 KCMF1Q9P0J7 381 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 UVRAGQ9P2Y5 699 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NCDNQ9UBB6 729 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MORF4L1Q9UBU8 362 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NDUFAF1Q9Y375 327 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MMACHCQ9Y4U1 282 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 KLK4Q9Y5K2 254 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NUP160Q12769 1436 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MAGI1Q96QZ7 1491 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 PQLC2LA1A4F0 135 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ILVBLA1L0T0 632 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 POTEMA6NI47 508 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NBPF26B4DH59 902 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SUPT3HB4E1H0 165 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NEDD8-MDP1E9PL57 170 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ZNF213O14771 459 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TCAPO15273 167 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 INPPL1O15357 1258 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PPIP5K2O43314 1243 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DPM1O60762 260 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 AKAP3O75969 853 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 HAUS5O94927 633 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 RPP14O95059 124 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 DEXIO95424 95 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 UBTFL1P0CB47 393 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 STAG3L2P0CL84 134 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 BDKRB2P30411 391 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CLCN7P51798 805 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 EMP2P54851 167 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ERVK-24P63145 666 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SNTB2Q13425 540 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 TNFAIP1Q13829 316 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PTK6Q13882 451 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CHRNA2Q15822 529 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NADK2Q4G0N4 442 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ARMCX5Q6P1M9 558 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 POTEGQ6S5H5 508 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PLCZ1Q86YW0 608 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 UNC5BQ8IZJ1 945 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CENPLQ8N0S6 344 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 C12orf29Q8N999 325 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NUDT10Q8NFP7 164 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 OR52H1Q8NGJ2 320 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 OR52J3Q8NH60 311 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CCDC74AQ96AQ1 378 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 EXOSC8Q96B26 276 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 DGCR14Q96DF8 476 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 MTBPQ96DY7 904 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NECAB3Q96P71 396 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 SIGLEC11Q96RL6 698 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FAM213AQ9BRX8 229 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TLR10Q9BXR5 811 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MS4A5Q9H3V2 200 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 METTL8Q9H825 291 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 RAVER2Q9HCJ3 691 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 DCP1AQ9NPI6 582 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBR3-208ENST00000474426 SH3BP4Q9P0V3 963 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PTGFRNQ9P2B2 879 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NDRG2Q9UN36 371 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ERVW-1Q9UQF0 538 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CHKBQ9Y259 395 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 POFUT2Q9Y2G5 429 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PTGDR2Q9Y5Y4 395 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 UTYO14607 1347 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ZNF541Q9H0D2 1346 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 YEATS2Q9ULM3 1422 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FAM170BA6NMN3 283 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 INSIG1O15503 277 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 GPR32O75388 356 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 IL18RAPO95256 599 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MT-ND2P03891 347 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 THP07101 528 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 OR52Z1P0C646 297 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CBSLP0DN79 551 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 THRBP10828 461 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 RNH1P13489 461 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 NQO1P15559 274 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ZNF12P17014 697 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 LAP3P28838 519 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CASP1P29466 404 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CBSP35520 551 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FEN1P39748 380 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 MAGEB1P43366 347 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CEBPDP49716 269 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 CDK16Q00536 496 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SPIBQ01892 262 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CLCQ05315 142 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TOP3AQ13472 1001 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms