RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KDM1AO60341 852 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 PLIN3O60664 434 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CATP04040 527 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 C8GP07360 202 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 HOXC4P09017 264 aaPredicted RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 SLC35G4P0C7Q5 338 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 TPBGLP0DKB5 382 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 GNSP15586 552 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CD27P26842 260 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 AOAHP28039 575 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 ALDH3A1P30838 453 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 TRIM23P36406 574 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 GNPDA1P46926 289 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 SERPINB4P48594 390 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 BLKP51451 505 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CLCN7P51798 805 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 PRKAA2P54646 552 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 C21orf59P57076 290 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CLDN2P57739 230 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 GUCY1A3Q02108 690 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 FGL2Q14314 439 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 KRT33BQ14525 404 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 TEAD4Q15561 434 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CFAP157Q5JU67 520 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 C16orf46Q6P387 395 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CEP68Q76N32 757 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CHST15Q7LFX5 561 aaPredicted RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 RD3Q7Z3Z2 195 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CLEC14AQ86T13 490 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 LONP2Q86WA8 852 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 DCP2Q8IU60 420 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 C1orf210Q8IVY1 113 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CFAP206Q8IYR0 622 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 FSTL5Q8N475 847 aaPredicted RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 SPATA6LQ8N4H0 392 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 RAB42Q8N4Z0 105 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 BEND7Q8N7W2 519 aaPredicted RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 PPP4R1Q8TF05 950 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 EEF1AKMT1Q8WVE0 214 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 FUBP1Q96AE4 644 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 KLHDC7BQ96G42 594 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 HSPA12BQ96MM6 686 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 OR2M4Q96R27 311 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 EGFL8Q99944 293 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 UNKQ9C0B0 810 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 TFB2MQ9H5Q4 396 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CARS2Q9HA77 564 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CYP4F12Q9HCS2 524 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 CD274Q9NZQ7 290 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 TMEM216Q9P0N5 145 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 TMPRSS11EQ9UL52 423 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 PLXND1Q9Y4D7 1925 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 C17orf113A0A1B0GUU1 675 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 PRSS38A1L453 326 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 MGAT4DA6NG13 374 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 K7ESF4 209 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 GIPC1O14908 333 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 PI15O43692 258 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 ZBTB14O43829 449 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 KCNJ13O60928 360 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 KERAO60938 352 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 POP7O75817 140 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 TNFP01375 233 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 PROCP04070 461 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 IGHV4-34P06331 123 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 VIMP08670 466 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 THEGLP0DJG4 465 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 MPC1LP0DKB6 136 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 ACP5P13686 325 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CTSEP14091 401 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CD1DP15813 335 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 HOXA6P31267 233 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CCR7P32248 378 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 HALP42357 657 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 FNTBP49356 437 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CTSCP53634 463 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 GYS2P54840 703 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CBX1P83916 185 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 SP140Q13342 867 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 KHDC1Q4VXA5 237 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 TECRLQ5HYJ1 363 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 Q6ZSR6 202 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 NEK10Q6ZWH5 1172 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 WDR5BQ86VZ2 330 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 GPSM1Q86YR5 675 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CENPLQ8N0S6 344 aaPredicted RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 PLD6Q8N2A8 252 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 PELI3Q8N2H9 469 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 AFAP1L2Q8N4X5 818 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 FBXL6Q8N531 539 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 DTWD2Q8NBA8 298 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 OR2L2Q8NH16 312 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 RHEBL1Q8TAI7 183 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 RAB3IL1Q8TBN0 382 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 LKAAEAR1Q8TD35 194 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 MAGEC3Q8TD91 643 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms