RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SH3KBP1Q96B97 665 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 FBXL8Q96CD0 374 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 SLC39A13Q96H72 371 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 COG3Q96JB2 828 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 CFAP53Q96M91 514 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 CLSTN3Q9BQT9 956 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 LRRC61Q9BV99 259 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 ACSL5Q9ULC5 683 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 TTC7AQ9ULT0 858 aaPredicted RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 CARD8Q9Y2G2 431 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 STON1Q9Y6Q2 735 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 BAZ2BQ9UIF8 2168 aaKnown RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 MYH7BA7E2Y1 1941 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 TNRC6CQ9HCJ0 1690 aaKnown RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 FOCADQ5VW36 1801 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 ABCC4O15439 1325 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 IL16Q14005 1332 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 MAPK8IP3Q9UPT6 1336 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 NAV1Q8NEY1 1877 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 ADAMTSL1Q8N6G6 1762 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 CEMIPQ8WUJ3 1361 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MAP3K5Q99683 1374 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 PSME4Q14997 1843 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 A0A087WV62 115 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 CCDC194A0A1B0GVG4 234 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 CBY3A6NI87 242 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 IFNL4K9M1U5 179 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 TNPO2O14787 897 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 NCAM2O15394 837 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ZNF853P0CG23 659 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 CAPN2P17655 700 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 GNAZP19086 355 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ITIH1P19827 911 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MAOAP21397 527 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 PIK3R1P27986 724 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 PDIA3P30101 505 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 HOXC9P31274 260 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 HNF1BP35680 557 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 EIF2S3P41091 472 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 FASLGP48023 281 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 RIPK4P57078 832 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 GALNT1Q10472 559 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ELAVL2Q12926 359 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 GRAPQ13588 217 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ACVR2BQ13705 512 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 SMAD1Q15797 465 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 SLC18A3Q16572 532 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 HIGD2BQ4VC39 106 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ASPRV1Q53RT3 343 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 TAF1BQ53T94 588 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 CCSAPQ6IQ19 270 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 LIN54Q6MZP7 749 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 METTL2BQ6P1Q9 378 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 XRRA1Q6P2D8 792 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MARCH9Q86YJ5 346 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 TMEM57Q8N5G2 664 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 TSPYL6Q8N831 410 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 RDM1Q8NG50 284 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 OR2AK2Q8NG84 335 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 SVIPQ8NHG7 77 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 THAP6Q8TBB0 222 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 OMA1Q96E52 524 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 KTI12Q96EK9 354 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 RNFT2Q96EX2 444 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MASTLQ96GX5 879 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 RBM17Q96I25 401 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 METTL2AQ96IZ6 378 aaKnown RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MXRA8Q9BRK3 442 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MKKSQ9NPJ1 570 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 BEX4Q9NWD9 120 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ANAPC11Q9NYG5 84 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 NYAP2Q9P242 653 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 MARCH4Q9P2E8 410 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 LRCH1Q9Y2L9 728 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 DISP2A7MBM2 1401 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 TNS2Q63HR2 1409 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 NCOA3Q9Y6Q9 1424 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 LRRC37AA6NMS7 1700 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 QSER1Q2KHR3 1735 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 RGPD3A6NKT7 1758 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-203ENST00000473854 RGPD4Q7Z3J3 1758 aa1.62□□□□□ -2.15
CCDC39-203ENST00000473854 ARFGEF1Q9Y6D6 1849 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 KIAA0232Q92628 1395 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 BRCA1P38398 1863 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 DDX60LQ5H9U9 1706 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 NRXN2Q9P2S2 1712 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 H0YIN7 160 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 ACKR2O00590 384 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 EIF3DO15371 548 aaKnown RBP eCLIP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 KLK8O60259 260 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 IGHDP01880 384 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 CHRM4P08173 479 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 ACADMP11310 421 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 G6PDP11413 515 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 SLC2A4P14672 509 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 UGT1A4P22310 534 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 DRD3P35462 400 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 COX10Q12887 443 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 UBE4AQ14139 1066 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms