RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 STAT5AP42229 794 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 CAPZBP47756 277 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 ATP1A2P50993 1020 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 EPHA4P54764 986 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 GDF10P55107 478 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 FOXL2P58012 376 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 KCNC4Q03721 635 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 TLE1Q04724 770 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SRSF1Q07955 248 aaKnown RBP eCLIP7.9□□□□□ -1.144e-8■■■□□ 14.6
USP48-207ENST00000471752 KCNAB2Q13303 367 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 ERV3-1Q14264 604 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 GPR19Q15760 415 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SLC14A2Q15849 920 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 PPP2R5EQ16537 467 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SKOR2Q2VWA4 1001 aaPredicted RBP7.9□□□□□ -1.14
USP48-207ENST00000471752 ZNF658BQ4V348 819 aaPredicted RBP7.9□□□□□ -1.14
USP48-207ENST00000471752 METRNLQ641Q3 311 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 CCDC70Q6NSX1 233 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 BORAQ6PGQ7 559 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SARM1Q6SZW1 724 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 CEACAM20Q6UY09 585 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 WASH2PQ6VEQ5 465 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 GLT6D1Q7Z4J2 308 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 AMZ2Q86W34 360 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 PLXDC1Q8IUK5 500 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 CNGA4Q8IV77 575 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 TRIM48Q8IWZ4 208 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 PIANPQ8IYJ0 282 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 LRRC57Q8N9N7 239 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 DDHD1Q8NEL9 900 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 KLHL6Q8WZ60 621 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 STARD8Q92502 1023 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SH3KBP1Q96B97 665 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 CXorf40BQ96DE9 158 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 ABHD17AQ96GS6 310 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 DPYSL5Q9BPU6 564 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 TRIM55Q9BYV6 548 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 ULBP3Q9BZM4 244 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 FAM117AQ9C073 453 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 KLHL25Q9H0H3 589 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SLC25A18Q9H1K4 315 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 EPN3Q9H201 632 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 ZNF768Q9H5H4 540 aaKnown RBP7.9□□□□□ -1.14
USP48-207ENST00000471752 GPN2Q9H9Y4 310 aaPredicted RBP7.9□□□□□ -1.14
USP48-207ENST00000471752 UCK1Q9HA47 277 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 WASH6PQ9NQA3 447 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 PCDHA3Q9Y5H8 950 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 PRSS21Q9Y6M0 314 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 RPS6KL1Q9Y6S9 549 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 DOPEY2Q9Y3R5 2298 aa7.9□□□□□ -1.15
USP48-207ENST00000471752 ITPR2Q14571 2701 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 GRID2IPA4D2P6 1211 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 C2orf72A6NCS6 295 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 OR6C74A6NCV1 312 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 OR51F1A6NGY5 319 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 ZNF891A8MT65 544 aaPredicted RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 APOC4-APOC2K7ER74 178 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 MASP2O00187 686 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 BTN3A3O00478 584 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 STX7O15400 261 aaKnown RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 KCNN4O15554 427 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 LDB2O43679 373 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 KATNA1O75449 491 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 NDUFA10O95299 355 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 PRAMEF1O95521 474 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 APOC2P02655 101 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 ANKRD34CP0C6C1 535 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 TPBGLP0DKB5 382 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 RBP3P10745 1247 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 NELFEP18615 380 aaKnown RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 FECHP22830 423 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 CTNNA1P35221 906 aaKnown RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 DLSTP36957 453 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 GRIA1P42261 906 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 EIF3EP60228 445 aaKnown RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 CDC20Q12834 499 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 MPP3Q13368 585 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 ODF2Q5BJF6 829 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 PDPK2PQ6A1A2 396 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 C11orf63Q6NUN7 778 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 TMEM139Q8IV31 216 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 CFAP206Q8IYR0 622 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 CLDN19Q8N6F1 224 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 FAM71DQ8N9W8 422 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 ZSCAN1Q8NBB4 408 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 OR4E2Q8NGC2 313 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 CT55Q8WUE5 264 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 RBM41Q96IZ5 413 aaKnown RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 SLC41A2Q96JW4 573 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 DESI2Q9BSY9 194 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 OSBPL8Q9BZF1 889 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 GBA3Q9H227 469 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 XKR8Q9H6D3 395 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 ASB8Q9H765 288 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 IMP3Q9NV31 184 aaKnown RBP7.89□□□□□ -1.15
USP48-207ENST00000471752 LCMT1Q9UIC8 334 aa7.89□□□□□ -1.15
USP48-207ENST00000471752 CELSR2Q9HCU4 2923 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms