RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 KRT81Q14533 505 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF169Q14929 603 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 PRKD1Q15139 912 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 PCSK7Q16549 785 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 PPP1R15BQ5SWA1 713 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 Q6ZS92 163 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 MON1BQ7L1V2 547 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 HOOK3Q86VS8 718 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 KMT5CQ86Y97 462 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 PHF13Q86YI8 300 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 CEP97Q8IW35 865 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 GPR135Q8IZ08 494 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 D2HGDHQ8N465 521 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 GPR26Q8NDV2 337 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 OR4E2Q8NGC2 313 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 OR1N1Q8NGS0 311 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 OR8K5Q8NH50 307 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 OR1L3Q8NH93 324 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ITLN2Q8WWU7 325 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 GLYATL1Q969I3 302 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC120Q96HB5 630 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 C12orf66Q96MD2 445 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 WDR24Q96S15 920 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 TIMM29Q9BSF4 260 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 NAA15Q9BXJ9 866 aaKnown RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 GPR63Q9BZJ6 419 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 EPS8L2Q9H6S3 715 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 BPIFA1Q9NP55 256 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ATP13A2Q9NQ11 1180 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 HAUS2Q9NVX0 235 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 RBM22Q9NW64 420 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 MYO1AQ9UBC5 1043 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 EPHA6Q9UF33 1036 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 CDC23Q9UJX2 597 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 NEU2Q9Y3R4 380 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 MDC1Q14676 2089 aaKnown RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 MED13LQ71F56 2210 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 HIVEP1P15822 2718 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 A0A1W2PQJ5 194 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC78A2IDD5 438 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC66A2RUB6 948 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 OR2AG2A6NM03 316 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 FZD6O60353 706 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 UNC5CO95185 931 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 PEX11BO96011 259 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 F10P00742 488 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 IGHEP01854 428 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TPM2P07951 284 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 STSP08842 583 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CBSLP0DN79 551 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 DRD2P14416 443 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 PVRP15151 417 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 HLA-DPA1P20036 260 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 SSTR2P30874 369 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 AKT1P31749 480 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 SERPINB6P35237 376 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CBSP35520 551 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TLE4Q04727 773 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 NFE2L1Q14494 772 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 SSPNQ14714 243 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 RPE65Q16518 533 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 DEFB110Q30KQ9 67 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 KRTAP21-3Q3LHN1 58 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 RALGPS1Q5JS13 557 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC122Q5T0U0 273 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 FAM182AQ5T1J6 154 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 FKBP15Q5T1M5 1219 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 AGAP7PQ5VUJ5 663 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 FAAH2Q6GMR7 532 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TMEM207Q6UWW9 146 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 ABRAXAS1Q6UWZ7 409 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 SPOCD1Q6ZMY3 1216 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 BNC2Q6ZN30 1099 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-204ENST00000471488 SHISA6Q6ZSJ9 500 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 DET1Q7L5Y6 550 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 NLRP8Q86W28 1048 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 AMZ2Q86W34 360 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 BCORP1Q8N888 145 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CCNYQ8ND76 341 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CATSPER1Q8NEC5 780 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 NAT14Q8WUY8 206 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 SPOCK2Q92563 424 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 AGAP4Q96P64 663 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 IP6K3Q96PC2 410 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CD180Q99467 661 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 AGPAT1Q99943 283 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 ZSCAN5AQ9BUG6 496 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TDRD1Q9BXT4 1180 aaKnown RBP6.69□□□□□ -1.34
HDAC1-204ENST00000471488 ADGRE3Q9BY15 652 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TRIM8Q9BZR9 551 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TRIM7Q9C029 511 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 WWP1Q9H0M0 922 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 GANQ9H2C0 597 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 ZFYVE1Q9HBF4 777 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC1-204ENST00000471488 TXLNGQ9NUQ3 528 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 PARVAQ9NVD7 372 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 FBXL4Q9UKA2 621 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 CDYLQ9Y232 598 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 PPIL1Q9Y3C6 166 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms