RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 IGSF5Q9NSI5 407 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 FGFR1OP2Q9NVK5 253 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 OXSMQ9NWU1 459 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 NCKIPSDQ9NZQ3 722 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 MBD1Q9UIS9 605 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-207ENST00000471218 CRLS1Q9UJA2 301 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 TRMT6Q9UJA5 497 aaKnown RBP9.04□□□□□ -0.96
PTPRE-207ENST00000471218 ARL2BPQ9Y2Y0 163 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 DHRS7Q9Y394 339 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 STON1Q9Y6Q2 735 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 ZNF106Q9H2Y7 1883 aaKnown RBP9.04□□□□□ -0.96
PTPRE-207ENST00000471218 BPTFQ12830 3046 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 SPEGQ15772 3267 aa9.04□□□□□ -0.96
PTPRE-207ENST00000471218 A0A1B0GTW7 788 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 SPAARA0A1B0GVQ0 90 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 UBA6A0AVT1 1052 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 OR51F1A6NGY5 319 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 FOXO6A8MYZ6 492 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 G3V2L1 256 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 WNT9AO14904 365 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 PHGDHO43175 533 aaKnown RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 BNIP3LO60238 219 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 NPHS1O60500 1241 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 KERAO60938 352 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 ADAM23O75077 832 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 CER1O95813 267 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 C1SP09871 688 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 OR56A5P0C7T3 313 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 ZNF883P0CG24 379 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 CCDC166P0CW27 439 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 TPBGLP0DKB5 382 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 ADRB3P13945 408 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 GKP32189 559 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 IL12RB1P42701 662 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 CDKN2DP55273 166 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 IL2P60568 153 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 PLOD1Q02809 727 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 RALGDSQ12967 914 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 STX3Q13277 289 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 SEMA3AQ14563 771 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 CHRNA6Q15825 494 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 TECRLQ5HYJ1 363 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 RBM20Q5T481 1227 aaKnown RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 TTC19Q6DKK2 380 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 KIAA1211LQ6NV74 962 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 FBXL19Q6PCT2 694 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 FAM151BQ6UXP7 276 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 LIPIQ6XZB0 460 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 NEK10Q6ZWH5 1172 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 USP30Q70CQ3 517 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 TAS2R42Q7RTR8 314 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 GLRX5Q86SX6 157 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 CRLF3Q8IUI8 442 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 GALNT15Q8N3T1 639 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 FSTL5Q8N475 847 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 TMEM151AQ8N4L1 468 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 OR2T3Q8NH03 318 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 PPP1R14CQ8TAE6 165 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 STAG3L4Q8TBR4 150 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 ASB12Q8WXK4 309 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 INPP5DQ92835 1189 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 FAR2Q96K12 515 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 PCED1AQ9H1Q7 454 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 SPATS2LQ9NUQ6 558 aaKnown RBP9.03□□□□□ -0.96
PTPRE-207ENST00000471218 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 TMEM216Q9P0N5 145 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 FZD4Q9ULV1 537 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 MED16Q9Y2X0 877 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 ACACAQ13085 2346 aa9.03□□□□□ -0.96
PTPRE-207ENST00000471218 IGHV1OR15-9A0A0B4J2B8 117 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 E5RI56 91 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 STX16-NPEPL1H3BU86 382 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 TAF4O00268 1085 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CCL22O00626 93 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 STX16O14662 325 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 BUD23O43709 281 aaKnown RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 SMIM24O75264 130 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 DCTN3O75935 186 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 IPO13O94829 963 aaKnown RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 SLC4A1P02730 911 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 FTH1P02794 183 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 EPHX1P07099 455 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 FGF3P11487 239 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CD59P13987 128 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CD1DP15813 335 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 ALOX15P16050 662 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 GABRG2P18507 467 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 DGKAP23743 735 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CD6P30203 668 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 NUMBP49757 651 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CLCN7P51798 805 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 TIAL1Q01085 375 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 MESP2Q0VG99 397 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 BST1Q10588 318 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 SP140Q13342 867 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CHI3L2Q15782 390 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CST6Q15828 149 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 ZNF789Q5FWF6 425 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CTSL3PQ5NE16 218 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 PLEKHS1Q5SXH7 462 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms