RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 AP1S1P61966 158 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 SLC25A11Q02978 314 aaKnown RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 IL10RBQ08334 325 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 ILF3Q12906 894 aaKnown RBP eCLIP5.75□□□□□ -1.49
VARS-222ENST00000470953 CBLBQ13191 982 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 NFATC2Q13469 925 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 ATP1A4Q13733 1029 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 DPYSQ14117 519 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 PDK2Q15119 407 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 KYNUQ16719 465 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 CCDC181Q5TID7 509 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 VWA5B1Q5TIE3 1220 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 FAAH2Q6GMR7 532 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 TIGD7Q6NT04 549 aaPredicted RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 PWWP2BQ6NUJ5 590 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 MTFR2Q6P444 385 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 BRAT1Q6PJG6 821 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 SARM1Q6SZW1 724 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 POLNQ7Z5Q5 900 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 CCDC50Q8IVM0 306 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 PLPP6Q8IY26 295 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 NDUFAF2Q8N183 169 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 CBARPQ8N350 705 aaPredicted RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.75□□□□□ -1.49
VARS-222ENST00000470953 ZBTB2Q8N680 514 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 ZNF592Q92610 1267 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 ZNF599Q96NL3 588 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 TUBGCP5Q96RT8 1024 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 SLX1AQ9BQ83 275 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 ZNF670Q9BS34 389 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 PACSIN1Q9BY11 444 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 GPR87Q9BY21 358 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 GSDMCQ9BYG8 508 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 KLC2Q9H0B6 622 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 NOL6Q9H6R4 1146 aaKnown RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 LRRC19Q9H756 370 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 PDFQ9HBH1 243 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 PCDH18Q9HCL0 1135 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 DNAJB12Q9NXW2 375 aaKnown RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 OGFRQ9NZT2 677 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 C5AR2Q9P296 337 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 LHX3Q9UBR4 397 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 SUFUQ9UMX1 484 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 FARSAQ9Y285 508 aaKnown RBP5.75□□□□□ -1.49
VARS-222ENST00000470953 ATP8A1Q9Y2Q0 1164 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
VARS-222ENST00000470953 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 WISP2O76076 250 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 RECQL5O94762 991 aaPredicted RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 ANKRD34CP0C6C1 535 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 CYP2A6P11509 494 aaPredicted RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 IGFBP2P18065 325 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 ADCY8P40145 1251 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 CA7P43166 264 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 FASLGP48023 281 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 POLR2LP62875 67 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 DYNLT1P63172 113 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 SRSF2Q01130 221 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 MMRN1Q13201 1228 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 DPYSL3Q14195 570 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 IL11RAQ14626 422 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 ACOX1Q15067 660 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 AGERQ15109 404 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 HIF1AQ16665 826 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 DEFB113Q30KQ7 82 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 MARC1Q5VT66 337 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 LYPLAL1Q5VWZ2 237 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 DENND2CQ68D51 928 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 ARHGAP36Q6ZRI8 547 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 CYP4V2Q6ZWL3 525 aaPredicted RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 USP45Q70EL2 814 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 MTERF4Q7Z6M4 381 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 KIAA1328Q86T90 577 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 SRLQ86TD4 932 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 ZSWIM9Q86XI8 627 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 RFX6Q8HWS3 928 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 CAMK1DQ8IU85 385 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 TXLNBQ8N3L3 684 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 SFRP1Q8N474 314 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 ARFGAP1Q8N6T3 406 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 PPM1NQ8N819 430 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 SLC38A9Q8NBW4 561 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 TSEN2Q8NCE0 465 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 CCNYQ8ND76 341 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 SLC35G2Q8TBE7 412 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 C9orf72Q96LT7 481 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 ZNF641Q96N77 438 aaPredicted RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 TBC1D10AQ9BXI6 508 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 POLR1EQ9GZS1 481 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 SUV39H2Q9H5I1 410 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 NT5MQ9NPB1 228 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 PCDH12Q9NPG4 1184 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 NOVA2Q9UNW9 492 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.74□□□□□ -1.49
VARS-222ENST00000470953 MFHAS1Q9Y4C4 1052 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 HEY1Q9Y5J3 304 aa5.74□□□□□ -1.49
VARS-222ENST00000470953 INTS1Q8N201 2190 aaKnown RBP5.74□□□□□ -1.49
VARS-222ENST00000470953 DOCK10Q96BY6 2186 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms