RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 AIF1P55008 147 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 KRT83P78385 493 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 SULT2A1Q06520 285 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CCDC15Q0P6D6 951 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 SLC12A1Q13621 1099 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CCNIQ14094 377 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 KCNAB1Q14722 419 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ANGPT1Q15389 498 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 HADHQ16836 314 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CDO1Q16878 200 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 PTPN20Q4JDL3 420 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TMEM196Q5HYL7 178 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 MPP7Q5T2T1 576 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 DEPDC1Q5TB30 811 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 MANEALQ5VSG8 457 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ACAD10Q6JQN1 1059 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 SCYL2Q6P3W7 929 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 OLFML1Q6UWY5 402 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 KIAA0408Q6ZU52 694 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ARCQ7LC44 396 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 MAVSQ7Z434 540 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TAC4Q86UU9 113 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 LGI2Q8N0V4 545 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 DEFB106AQ8N104 65 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CARNMT1Q8N4J0 409 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TSTD1Q8NFU3 115 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 DQX1Q8TE96 717 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TMEM171Q8WVE6 324 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF653Q96CK0 615 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ARPC5LQ9BPX5 153 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 MAGEB5Q9BZ81 275 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 LINC00597Q9H2U6 94 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 HAUS4Q9H6D7 363 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 NMUR1Q9HB89 426 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ACP6Q9NPH0 428 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 KLC4Q9NSK0 619 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 SLC25A13Q9UJS0 675 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 AGO1Q9UL18 857 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 NAALADL1Q9UQQ1 740 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 EPN1Q9Y6I3 576 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 HELZP42694 1942 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 PATJQ8NI35 1801 aa6.34□□□□□ -1.4
PTCD3-208ENST00000469585 PRUNE2Q8WUY3 3088 aa6.34□□□□□ -1.4
PTCD3-208ENST00000469585 GREB1Q4ZG55 1949 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 TICRRQ7Z2Z1 1910 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 A0A1B0GVM2 712 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 FAM234BA2RU67 622 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 EIF3CLB5ME19 914 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 MPPED1O15442 326 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 RGS10O43665 173 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 PEX1O43933 1283 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 PRPSAP2O60256 369 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 TSPAN3O60637 253 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 TULP3O75386 442 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CLDN11O75508 207 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 NEBLO76041 1014 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 APBB3O95704 486 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CALCAP01258 141 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 C6P13671 934 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 MMP8P22894 467 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 PSMA2P25787 234 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CASP14P31944 242 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 AVPR1BP47901 424 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 RPL34P49207 117 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 MAPK10P53779 464 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 SEC24CP53992 1094 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 NAP1L1P55209 391 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 GEMIN4P57678 1058 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 ABHD18Q0P651 414 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 FOXI1Q12951 378 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 EIF2B5Q13144 721 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 DMC1Q14565 340 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 ELF2Q15723 593 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF528Q3MIS6 628 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CCDC122Q5T0U0 273 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 RWDD4Q6NW29 188 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 RHBDF2Q6PJF5 856 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 SARM1Q6SZW1 724 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CRTC1Q6UUV9 634 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 SERPINA13PQ6UXR4 307 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 PHF13Q86YI8 300 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 IZUMO1Q8IYV9 350 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 PAF1Q8N7H5 531 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 TERB1Q8NA31 727 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 GLIS1Q8NBF1 620 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 VPS37AQ8NEZ2 397 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 RPLP0P6Q8NHW5 317 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CLEC4CQ8WTT0 213 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 SLC20A1Q8WUM9 679 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 NDRG1Q92597 394 aaKnown RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 RFKQ969G6 155 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 FKBP10Q96AY3 582 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 CLDN23Q96B33 292 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 TMEM41AQ96HV5 264 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 FBXL20Q96IG2 436 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 NAP1L5Q96NT1 182 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-208ENST00000469585 MCEEQ96PE7 176 aa6.33□□□□□ -1.4
PTCD3-208ENST00000469585 EIF3CQ99613 913 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms