RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 C8orf33Q9H7E9 229 aaPredicted RBP10.03□□□□□ -0.8
MSH5-213ENST00000468136 PARVBQ9HBI1 364 aa10.03□□□□□ -0.8
MSH5-213ENST00000468136 ZBTB26Q9HCK0 441 aa10.03□□□□□ -0.8
MSH5-213ENST00000468136 UTP6Q9NYH9 597 aaKnown RBP10.03□□□□□ -0.8
MSH5-213ENST00000468136 ARMCX1Q9P291 453 aa10.03□□□□□ -0.8
MSH5-213ENST00000468136 PRPF19Q9UMS4 504 aaKnown RBP10.03□□□□□ -0.8
MSH5-213ENST00000468136 DNMT3AQ9Y6K1 912 aaPredicted RBP10.03□□□□□ -0.8
MSH5-213ENST00000468136 C17orf113A0A1B0GUU1 675 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 A0A1W2PPC1 479 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 DYTNA2CJ06 578 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 BBIP1A8MTZ0 92 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 E9PBE3 544 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 ANHXE9PGG2 379 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 K7EPI3 171 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 E2F3O00716 465 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 NEMP1O14524 444 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 LIN7AO14910 233 aaPredicted RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 DCXO43602 365 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 LZTS3O60299 673 aaPredicted RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 KLHL41O60662 606 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 TM7SF2O76062 418 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 SLCO2B1O94956 709 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 KRT16P08779 473 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 C7P10643 843 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 COX4I1P13073 169 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 LBPP18428 481 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 CCND1P24385 295 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PIK3R1P27986 724 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 EPHA3P29320 983 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PGM1P36871 562 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PRLHRP49683 370 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 SH3BP2P78314 561 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 MXRA7P84157 204 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 KDSRQ06136 332 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 CAMK2GQ13555 558 aaPredicted RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 STARD3Q14849 445 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PTPRRQ15256 657 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 TRMT5Q32P41 509 aaKnown RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 ACSBG2Q5FVE4 666 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 VWA5B1Q5TIE3 1220 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 LARP4Q71RC2 724 aaKnown RBP eCLIP10.02□□□□□ -0.81
MSH5-213ENST00000468136 GALNT13Q8IUC8 556 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 FAM9CQ8IZT9 166 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PELI3Q8N2H9 469 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 CLDN19Q8N6F1 224 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 FBXO15Q8NCQ5 510 aaPredicted RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 TRPC4APQ8TEL6 797 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 TWIST2Q8WVJ9 160 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 ASB11Q8WXH4 323 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 DNASE1L2Q92874 299 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 EXT2Q93063 718 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 NUS1Q96E22 293 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 ZFYVE19Q96K21 471 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 LINC00615Q96LM1 132 aaPredicted RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 OR52B2Q96RD2 323 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 P2RY13Q9BPV8 354 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 CCM2Q9BSQ5 444 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 NTMT1Q9BV86 223 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 RIOK2Q9BVS4 552 aaKnown RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 SLC29A3Q9BZD2 475 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 CD244Q9BZW8 370 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 RSPH9Q9H1X1 276 aaPredicted RBP10.02□□□□□ -0.81
MSH5-213ENST00000468136 EFCAB1Q9HAE3 211 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PRSS16Q9NQE7 514 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 WWOXQ9NZC7 414 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 CLEC1BQ9P126 229 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 GALPQ9UBC7 116 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 OPTCQ9UBM4 332 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 GPR34Q9UPC5 381 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 ANGPTL3Q9Y5C1 460 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PRSS21Q9Y6M0 314 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 C2orf16Q68DN1 1984 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 PDE4DIPQ5VU43 2346 aa10.02□□□□□ -0.81
MSH5-213ENST00000468136 OTOL1A6NHN0 477 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 CCDC85CA6NKD9 419 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 IQCF5A8MTL0 148 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 A8MX80 341 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 GFYI3L273 518 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 ARNTLO00327 626 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 SYNCRIPO60506 623 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 UGDHO60701 494 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 KCNJ13O60928 360 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 STK16O75716 305 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 CATP04040 527 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 EPHX1P07099 455 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 EBLN1P0CF75 366 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 IDO1P14902 403 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 MAP4P27816 1152 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 CCR7P32248 378 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 ETV3P41162 512 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 IL12RB1P42701 662 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 RPIAP49247 311 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 HK3P52790 923 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 B4GALNT1Q00973 533 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 MAD2L1Q13257 205 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 GTF2H2Q13888 395 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 UBAP2LQ14157 1087 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 RBBP7Q16576 425 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 UGT3A2Q3SY77 523 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 SPATS1Q496A3 300 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 289.1 ms