RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 H2AFXP16104 143 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-205ENST00000466897 AOAHP28039 575 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 SKIV2L2P42285 1042 aaKnown RBP14.92□□□□□ -0.02
NPHP4-205ENST00000466897 SERPINB9P50453 376 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 METRNLQ641Q3 311 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 UGT3A1Q6NUS8 523 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 XKR5Q6UX68 686 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 DBX2Q6ZNG2 339 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 TAOK1Q7L7X3 1001 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 NRROSQ86YC3 692 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 BEND7Q8N7W2 519 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-205ENST00000466897 EDEM2Q9BV94 578 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 GTPBP2Q9BX10 602 aaKnown RBP14.92□□□□□ -0.02
NPHP4-205ENST00000466897 DPEP2Q9H4A9 486 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 IL21RQ9HBE5 538 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 POPDC3Q9HBV1 291 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 TM7SF3Q9NS93 570 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 ARGLU1Q9NWB6 273 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-205ENST00000466897 TAS2R13Q9NYV9 303 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 ACSL5Q9ULC5 683 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 VWA7Q9Y334 891 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 PRKAB1Q9Y478 270 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 ST14Q9Y5Y6 855 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 IKBKGQ9Y6K9 419 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 ARID1BQ8NFD5 2236 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-205ENST00000466897 FAM95CA0A1B0GW59 222 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 SLC5A10A0PJK1 596 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 E5RI56 91 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 EIF3FO00303 357 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-205ENST00000466897 CDX4O14627 284 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-205ENST00000466897 NIPSNAP2O75323 286 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 VPS26AO75436 327 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 GPC4O75487 556 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 ITGA2BP08514 1039 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 FDXRP22570 491 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 GCAP28676 217 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 ATP5DP30049 168 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 CCR7P32248 378 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 MSH2P43246 934 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 CLCN7P51798 805 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 POU4F1Q01851 419 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 GBX1Q14549 363 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 TMED2Q15363 201 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 PLA2G4EQ3MJ16 856 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 PRAMEF14Q5SWL7 426 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 PLEKHS1Q5SXH7 462 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 RBM20Q5T481 1227 aaKnown RBP14.91□□□□□ -0.02
NPHP4-205ENST00000466897 HECTD2Q5U5R9 776 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 AGAP9Q5VTM2 703 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 ADGRD1Q6QNK2 874 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 OTOAQ7RTW8 1153 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 TDRPQ86YL5 185 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 UHMK1Q8TAS1 419 aaKnown RBP14.91□□□□□ -0.02
NPHP4-205ENST00000466897 LKAAEAR1Q8TD35 194 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 LMX1AQ8TE12 382 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 DCAKDQ8WVC6 231 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 ASZ1Q8WWH4 475 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 DUSP23Q9BVJ7 150 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 COG4Q9H9E3 785 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 TMEM9BQ9NQ34 198 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 KLC4Q9NSK0 619 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 NLGN3Q9NZ94 848 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 KCNK6Q9Y257 313 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 DHRS7Q9Y394 339 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 PIEZO1Q92508 2521 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 DNAH14Q0VDD8 3507 aa14.91□□□□□ -0.02
NPHP4-205ENST00000466897 A6NCN8 305 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 IQCF5A8MTL0 148 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 SLCO2B1O94956 709 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 TRIM16O95361 564 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 SHBGP04278 402 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 APOA4P06727 396 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 F7P08709 466 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-205ENST00000466897 GIMD1P0DJR0 217 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 SLC2A4P14672 509 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 CHRM3P20309 590 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 IDSP22304 550 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 ACTR1BP42025 376 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 ACTR1AP61163 376 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 BNIP3Q12983 259 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 NFE2L1Q14494 772 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 SUZ12Q15022 739 aaKnown RBP14.9□□□□□ -0.02
NPHP4-205ENST00000466897 TTLL9Q3SXZ7 439 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 ABRAXAS1Q6UWZ7 409 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 CCDC91Q7Z6B0 441 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 TAF8Q7Z7C8 310 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 KRT222Q8N1A0 295 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 SLC25A45Q8N413 288 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 GPATCH11Q8N954 259 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 CCL4L1Q8NHW4 92 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 NAT14Q8WUY8 206 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 ELMO1Q92556 727 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 GLMNQ92990 594 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 ISL2Q96A47 359 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 TSPAN17Q96FV3 270 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 NDNQ99608 321 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 TMEM109Q9BVC6 243 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 UCKL1Q9NWZ5 548 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 TAAR2Q9P1P5 351 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 PSMC3IPQ9P2W1 217 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms