RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 MGAT5Q09328 741 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 SEPT7Q16181 437 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 ZNF789Q5FWF6 425 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 TEDDM1Q5T9Z0 273 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 METRNLQ641Q3 311 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 PTRHD1Q6GMV3 140 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 IYDQ6PHW0 289 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 ABRAXAS1Q6UWZ7 409 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 WASH2PQ6VEQ5 465 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 C17orf82Q86X59 251 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 CNTN4Q8IWV2 1026 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 C2CD4AQ8NCU7 369 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 HM13Q8TCT9 377 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 PATE1Q8WXA2 126 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 FMO2Q99518 471 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 TSSK1BQ9BXA7 367 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 TSPYL1Q9H0U9 437 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 WASH6PQ9NQA3 447 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 FBXO6Q9NRD1 293 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 MOCS1Q9NZB8 636 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 FAM8A1Q9UBU6 413 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 CRYL1Q9Y2S2 319 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 PCDHB1Q9Y5F3 818 aa14.19□□□□□ -0.14
DNMT3A-208ENST00000466601 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 CPED1A4D0V7 1026 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 IQCF5A8MTL0 148 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 TRIM16O95361 564 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ESR1P03372 595 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 F7P08709 466 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ITGB6P18564 788 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 FMO4P31512 558 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ACADVLP49748 655 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ADARP55265 1226 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 GPX6P59796 221 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 TUBB4BP68371 445 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 MPP1Q00013 466 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ZNF658BQ4V348 819 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 CTSL3PQ5NE16 218 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 AGAP9Q5VTM2 703 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 GUSBP11Q6P575 273 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 XKR5Q6UX68 686 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 C3orf62Q6ZUJ4 267 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 KRT222Q8N1A0 295 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 SFRP1Q8N474 314 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ARL14Q8N4G2 192 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 LILRA3Q8N6C8 439 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 OR6C4Q8NGE1 309 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 MAPK15Q8TD08 544 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ELMO1Q92556 727 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 BIRC8Q96P09 236 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 PANX3Q96QZ0 392 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 COG4Q9H9E3 785 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 TOR4AQ9NXH8 423 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 SCHIP1Q9P0W5 487 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ACSL5Q9ULC5 683 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 NFU1Q9UMS0 254 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ARHGEF17Q96PE2 2063 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-208ENST00000466601 ZFC3H1O60293 1989 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 KIR2DS5A0A0G2JLQ3 304 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 A0A0G2JNG1 304 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 H3BMM5 538 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 KIR2DS3K7RE56 304 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 LIN7AO14910 233 aaPredicted RBP14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 HAUS5O94927 633 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 PKMP14618 531 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 BRAFP15056 766 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 GLB1P16278 677 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 HALP42357 657 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 LEPRP48357 1165 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 BIRC2Q13490 618 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 KIR2DS5Q14953 304 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 PPM1JQ5JR12 505 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 ZNF449Q6P9G9 518 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 CNSTQ6PJW8 725 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 KIAA0408Q6ZU52 694 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 CYS1Q717R9 158 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 EFL1Q7Z2Z2 1120 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC9B2Q86UD5 537 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 SLCO6A1Q86UG4 719 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 RELL1Q8IUW5 271 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 IFI44Q8TCB0 444 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 LKAAEAR1Q8TD35 194 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC37A2Q8TED4 501 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 NAT6Q93015 286 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 LRRC4CQ9HCJ2 640 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 ZFATQ9P243 1243 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC17A6Q9P2U8 582 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 LRIT1Q9P2V4 623 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 PSMD13Q9UNM6 376 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 APOBEC2Q9Y235 224 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 PCDHGA1Q9Y5H4 931 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 RNF215Q9Y6U7 377 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 CEP250Q9BV73 2442 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 CFAP54Q96N23 3096 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 DMXL1Q9Y485 3027 aa14.17□□□□□ -0.14
DNMT3A-208ENST00000466601 RHPN2P1A8MT19 583 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 NUDT21O43809 227 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms