RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 AMZ1Q400G9 498 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 AGAP9Q5VTM2 703 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 MRNIPQ6NTE8 343 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 XKR5Q6UX68 686 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ZNF438Q7Z4V0 828 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 SPRED1Q7Z699 444 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 SDCCAG8Q86SQ7 713 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 TMPRSS12Q86WS5 348 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 UNC5BQ8IZJ1 945 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 RAB17Q9H0T7 212 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 LRRN3Q9H3W5 708 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 SARS2Q9NP81 518 aaKnown RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 C20orf96Q9NUD7 363 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ANGPTL2Q9UKU9 493 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ATXN7L1Q9ULK2 861 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 CHMP2BQ9UQN3 213 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 FAM169AQ9Y6X4 670 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 FRYQ5TBA9 3013 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 A0A1W2PQM1 296 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 KLHL33A6NCF5 533 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 IQCF5A8MTL0 148 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 NTN3O00634 580 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 PRMT5O14744 637 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 NDC80O14777 642 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 VIPP01282 170 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 F7P08709 466 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 OR56A5P0C7T3 313 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 XRCC1P18887 633 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 HALP42357 657 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 FASLGP48023 281 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 UBE2IP63279 158 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 SHC2P98077 582 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 FOXK2Q01167 660 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 PDIA2Q13087 525 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 TARDBPQ13148 414 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 BRD3Q15059 726 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 RPE65Q16518 533 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CDCP2Q5VXM1 449 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 C8orf74Q6P047 294 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 NAPRTQ6XQN6 538 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CCNI2Q6ZMN8 369 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 USP53Q70EK8 1073 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 ANKMY2Q8IV38 441 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 MMGT1Q8N4V1 131 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 NOA1Q8NC60 698 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 GPR150Q8NGU9 434 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 HM13Q8TCT9 377 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CXorf40BQ96DE9 158 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CFAP36Q96G28 342 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 INSM2Q96T92 566 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 SLC38A3Q99624 504 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 WDR83Q9BRX9 315 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 NAT9Q9BTE0 207 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 STN1Q9H668 368 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 VPS37BQ9H9H4 285 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 GRHL1Q9NZI5 618 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 ZC3H7BQ9UGR2 993 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CLCA2Q9UQC9 943 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 NEUROG3Q9Y4Z2 214 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 CFAP20Q9Y6A4 193 aaKnown RBP12.13□□□□□ -0.47
CHPF2-202ENST00000465601 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
CHPF2-202ENST00000465601 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 UBA6A0AVT1 1052 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 FAM221BA6H8Z2 402 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 QSOX1O00391 747 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 TTC4O95801 387 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 FTH1P02794 183 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 ERVK-10P10266 1014 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 OGNP20774 298 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 PDHA2P29803 388 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 FMO4P31512 558 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 GPR3P46089 330 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 PREPP48147 710 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 PPM1FP49593 454 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 PLTPP55058 493 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 CTBP1Q13363 440 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 SPIDRQ14159 915 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 CRYMQ14894 314 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 NR1D2Q14995 579 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 TYSND1Q2T9J0 566 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 ZNF658BQ4V348 819 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms