RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CCDC153Q494R4 210 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 DOK6Q6PKX4 331 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 ZC3HC1Q86WB0 502 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SLC22A18ASQ8N1D0 253 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 FITM2Q8N6M3 262 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 RASGEF1AQ8N9B8 481 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 FAM174AQ8TBP5 190 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SGF29Q96ES7 293 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 KLHDC7BQ96G42 594 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 GPR27Q9NS67 375 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 TMEM74BQ9NUR3 256 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 EMCNQ9ULC0 261 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CEP192Q8TEP8 1941 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 MUC6Q6W4X9 2439 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 PLXNB3Q9ULL4 1909 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CFAP99D6REC4 459 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 BCAT2O15382 392 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SGTAO43765 313 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 VEGFDO43915 354 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SNNO75324 88 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 UBOX5O94941 541 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 FUCA1P04066 466 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CEACAM5P06731 702 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 THEGLP0DJG4 465 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 RALBP11234 206 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 ATP1B2P14415 290 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 FMO4P31512 558 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 TCF15Q12870 199 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 N4BP2L1Q5TBK1 243 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 ZNF549Q6P9A3 640 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 PRR23BQ6ZRT6 265 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 DET1Q7L5Y6 550 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CLEC14AQ86T13 490 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 IQCHQ86VS3 1027 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 VPS39Q96JC1 886 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CLPBQ9H078 707 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 RASSF4Q9H2L5 321 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 PILRBQ9UKJ0 227 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SLC17A4Q9Y2C5 497 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 ANKRD6Q9Y2G4 727 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CAPN7Q9Y6W3 813 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 FRYLO94915 3013 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 PROCP04070 461 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 ZNF8P17098 575 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 RPS3P23396 243 aaKnown RBP eCLIP16.66■□□□□ 0.269e-10■■■■□ 25.3
EXOSC3-203ENST00000465229 THOP1P52888 689 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 CTSCP53634 463 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 OCRLQ01968 901 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 BST1Q10588 318 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 OVGP1Q12889 678 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 CTSL3PQ5NE16 218 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 PRSS33Q8NF86 280 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 ATXN7L3BQ96GX2 97 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 LRRC37BQ96QE4 947 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 PRRX2Q99811 253 aa16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 ZCCHC2Q9C0B9 1178 aaKnown RBP16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 MTO1Q9Y2Z2 717 aaKnown RBP16.66■□□□□ 0.26
EXOSC3-203ENST00000465229 LAMA1P25391 3075 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 TLR4O00206 839 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 CHUKO15111 745 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 NUAK1O60285 661 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 ATP5HO75947 161 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 ESR1P03372 595 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 PKMP14618 531 aaKnown RBP16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 HTR1BP28222 390 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 CSNK1EP49674 416 aaKnown RBP16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 AFF3P51826 1226 aaKnown RBP16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 CHI3L2Q15782 390 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 LPAL2Q16609 132 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 RBM20Q5T481 1227 aaKnown RBP16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 TMEM220Q6QAJ8 160 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 ENPP7Q6UWV6 458 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 MACC1Q6ZN28 852 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 SYT12Q8IV01 421 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 ACVR1CQ8NER5 493 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 OR56A4Q8NGH8 313 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 PIGKQ92643 395 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 WDR92Q96MX6 357 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 NDNQ99608 321 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 FGF22Q9HCT0 170 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 NPHS2Q9NP85 383 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 PNMA8BQ9ULN7 279 aaPredicted RBP16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 PCDHB1Q9Y5F3 818 aa16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 PCYT1BQ9Y5K3 369 aaPredicted RBP16.65■□□□□ 0.26
EXOSC3-203ENST00000465229 CACNA1EQ15878 2313 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 A0A096LPK6 155 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 SPTY2D1-AS1A0A0U1RR47 76 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 OR2AG2A6NM03 316 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 DNAJC6O75061 913 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 AP2A2O94973 939 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 APOA4P06727 396 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 COL6A2P12110 1019 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 GNSP15586 552 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 KELP23276 732 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 GRK2P25098 689 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 PTK2BQ14289 1009 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 ZC3H14Q6PJT7 736 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms