RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 NRSN2Q9GZP1 204 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 DPH5Q9H2P9 285 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 STN1Q9H668 368 aaKnown RBP16.72■□□□□ 0.27
VPS52-215ENST00000464425 MRM3Q9HC36 420 aaKnown RBP16.72■□□□□ 0.27
VPS52-215ENST00000464425 SYBUQ9NX95 663 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 ZNF624Q9P2J8 865 aaPredicted RBP16.72■□□□□ 0.27
VPS52-215ENST00000464425 PSMD13Q9UNM6 376 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 IGLV3-16A0A075B6K0 115 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 PRAMEF33A0A0G2JMD5 474 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 TMEM8BA6NDV4 472 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 MGAT4DA6NG13 374 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 VIPP01282 170 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 POLBP06746 335 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 XRCC1P18887 633 aaPredicted RBP16.71■□□□□ 0.27
VPS52-215ENST00000464425 NMBRP28336 390 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 SLC19A1P41440 591 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 INHBCP55103 352 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 UBE2IP63279 158 aaKnown RBP16.71■□□□□ 0.27
VPS52-215ENST00000464425 GUCY2DQ02846 1103 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 ACVR1Q04771 509 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 DMPKQ09013 629 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 MAP9Q49MG5 647 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 BCL7AQ4VC05 210 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 AGAP9Q5VTM2 703 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 FOXR1Q6PIV2 292 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 AFTPHQ6ULP2 937 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 CES3Q6UWW8 571 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 WASH2PQ6VEQ5 465 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 PIM3Q86V86 326 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 TRIM48Q8IWZ4 208 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 CFAP206Q8IYR0 622 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 PDIK1LQ8N165 341 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 OR4L1Q8NH43 312 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 SH3KBP1Q96B97 665 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 NXPE2Q96DL1 559 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 SIGLEC10Q96LC7 697 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 FAM129AQ9BZQ8 928 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 EPB41L5Q9HCM4 733 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 WASH6PQ9NQA3 447 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 FAM114A2Q9NRY5 505 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 DMGDHQ9UI17 866 aaKnown RBP16.71■□□□□ 0.27
VPS52-215ENST00000464425 SATB2Q9UPW6 733 aa16.71■□□□□ 0.27
VPS52-215ENST00000464425 WDFY3Q8IZQ1 3526 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 FREM2Q5SZK8 3169 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 IGHV1OR21-1A0A087WYE8 117 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 A0A1W2PNU3 283 aaPredicted RBP16.7■□□□□ 0.26
VPS52-215ENST00000464425 CPNE6O95741 557 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 HOXB3P14651 431 aaPredicted RBP16.7■□□□□ 0.26
VPS52-215ENST00000464425 MPSTP25325 297 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 MAPK9P45984 424 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 PRLHRP49683 370 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 ARL4CP56559 192 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 GABREP78334 506 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 RTP5Q14D33 572 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 HIF1AQ16665 826 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 DNAJC21Q5F1R6 531 aaKnown RBP16.7■□□□□ 0.26
VPS52-215ENST00000464425 C3orf38Q5JPI3 329 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 METRNLQ641Q3 311 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 MPP5Q8N3R9 675 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 OR2L2Q8NH16 312 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.7■□□□□ 0.26
VPS52-215ENST00000464425 GRAMD1AQ96CP6 724 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 LRRC39Q96DD0 335 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 CXorf40BQ96DE9 158 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 AHCYL2Q96HN2 611 aaKnown RBP16.7■□□□□ 0.26
VPS52-215ENST00000464425 LINC00615Q96LM1 132 aaPredicted RBP16.7■□□□□ 0.26
VPS52-215ENST00000464425 NUDT22Q9BRQ3 303 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 TBC1D10AQ9BXI6 508 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 ZMYND15Q9H091 742 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 SEMA6CQ9H3T2 930 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 TREX1Q9NSU2 369 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 ZMIZ1Q9ULJ6 1067 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 SOX13Q9UN79 622 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 PRSS21Q9Y6M0 314 aa16.7■□□□□ 0.26
VPS52-215ENST00000464425 FAM237BA0A1B0GVD1 139 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 PMS2P1A4D2B8 440 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 TAF4O00268 1085 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 OR1I1O60431 355 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 BRINP1O60477 761 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 SLU7O95391 586 aaKnown RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 HALP42357 657 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 PLTPP55058 493 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 CFHR1Q03591 330 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 SEMA3AQ14563 771 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 TRADDQ15628 312 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 FASTKD1Q53R41 847 aaKnown RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 PHF19Q5T6S3 580 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 CASC4Q6P4E1 433 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 ZNF574Q6ZN55 896 aaPredicted RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 LDB1Q86U70 411 aaPredicted RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 LILRA3Q8N6C8 439 aaPredicted RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 LRRN4CLQ8ND94 238 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 OR10G6Q8NH81 332 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 MFSD3Q96ES6 412 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 SGSM3Q96HU1 749 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 TMEM74Q96NL1 305 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 CCM2Q9BSQ5 444 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 NAT9Q9BTE0 207 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 PHACTR1Q9C0D0 580 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms