RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 ZNF711Q9Y462 761 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 OTOGQ6ZRI0 2925 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 FBN2P35556 2912 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 OR5K3A6NET4 321 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 F5H423 210 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-224ENST00000464148 KCNK1O00180 336 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 KCNJ13O60928 360 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 BPIP17213 487 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 MX2P20592 715 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 ATP1A4Q13733 1029 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 NAA30Q147X3 362 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-224ENST00000464148 PCSK7Q16549 785 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 PLEKHS1Q5SXH7 462 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 LYPLAL1Q5VWZ2 237 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 LCN10Q6JVE6 187 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 OOSP2Q86WS3 158 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 DSELQ8IZU8 1212 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 FAM71BQ8TC56 605 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 MOCOSQ96EN8 888 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 PDLIM2Q96JY6 352 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 LRFN5Q96NI6 719 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 VPS35Q96QK1 796 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 ISCUQ9H1K1 167 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 IMP3Q9NV31 184 aaKnown RBP12.98□□□□□ -0.33
MRPL55-224ENST00000464148 C5AR2Q9P296 337 aa12.98□□□□□ -0.33
MRPL55-224ENST00000464148 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
MRPL55-224ENST00000464148 SKILP12757 684 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 GBE1Q04446 702 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 XRCC4Q13426 336 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 ATP13A5Q4VNC0 1218 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 VWA5B1Q5TIE3 1220 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 PRAMEF17Q5VTA0 474 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 CCDC70Q6NSX1 233 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
MRPL55-224ENST00000464148 RAB43Q86YS6 212 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 BRSK1Q8TDC3 778 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 HDAC11Q96DB2 347 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-224ENST00000464148 RANBP9Q96S59 729 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 SLC7A5P2Q9GIP4 190 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 BPIFA1Q9NP55 256 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 LATS2Q9NRM7 1088 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 IGSF5Q9NSI5 407 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 AIPL1Q9NZN9 384 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 TMPRSS11EQ9UL52 423 aa12.97□□□□□ -0.33
MRPL55-224ENST00000464148 COPG1Q9Y678 874 aaKnown RBP12.97□□□□□ -0.33
MRPL55-224ENST00000464148 CFAP20Q9Y6A4 193 aaKnown RBP12.97□□□□□ -0.33
MRPL55-224ENST00000464148 ARHGAP10A1A4S6 786 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 OR6C74A6NCV1 312 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 MYO1FO00160 1098 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 POP7O75817 140 aaKnown RBP12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ALPPP05187 535 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-224ENST00000464148 CYP2A7P20853 494 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 OTX2P32243 289 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 PRKCIP41743 596 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ARCN1P48444 511 aaKnown RBP12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ARSEP51690 589 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 DMPKQ09013 629 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ATP13A4Q4VNC1 1196 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 HGSNATQ68CP4 663 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 SARM1Q6SZW1 724 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 MAP7D3Q8IWC1 876 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 CARFQ8N187 725 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 CNTD1Q8N815 330 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 TRIB3Q96RU7 358 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ZNF670Q9BS34 389 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 CEP41Q9BYV8 373 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ZCCHC2Q9C0B9 1178 aaKnown RBP12.96□□□□□ -0.33
MRPL55-224ENST00000464148 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.33
MRPL55-224ENST00000464148 THAP2Q9H0W7 228 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 ACTR5Q9H9F9 607 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-224ENST00000464148 PADI2Q9Y2J8 665 aa12.96□□□□□ -0.33
MRPL55-224ENST00000464148 APCP25054 2843 aa12.96□□□□□ -0.34
MRPL55-224ENST00000464148 C9J4A7 227 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 MAP3K7O43318 606 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
MRPL55-224ENST00000464148 LCA5LO95447 670 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 MTHFD1P11586 935 aaKnown RBP12.95□□□□□ -0.34
MRPL55-224ENST00000464148 CDH3P22223 829 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 PBLDP30039 288 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-224ENST00000464148 RORAP35398 523 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 GLRBP48167 497 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 KPNA2P52292 529 aaKnown RBP12.95□□□□□ -0.34
MRPL55-224ENST00000464148 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 IFI35P80217 286 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-224ENST00000464148 SLC10A2Q12908 348 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-224ENST00000464148 ABRQ12979 859 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 PRKAA1Q13131 559 aa12.95□□□□□ -0.34
MRPL55-224ENST00000464148 NFE2L1Q14494 772 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms