RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PDLIM2Q96JY6 352 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 LINC00615Q96LM1 132 aaPredicted RBP12.71□□□□□ -0.38
XRN1-203ENST00000463916 AP1M1Q9BXS5 423 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 OCIAD1Q9NX40 245 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 KLHL3Q9UH77 587 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 TCRBV7S3A2A0A539 114 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 HGSO14964 777 aaPredicted RBP12.7□□□□□ -0.38
XRN1-203ENST00000463916 NVLO15381 856 aaKnown RBP12.7□□□□□ -0.38
XRN1-203ENST00000463916 KALRNO60229 2985 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 UBXN7O94888 489 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 PRLHRP49683 370 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 GFERP55789 205 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 CRADDP78560 199 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 CACNG1Q06432 222 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
XRN1-203ENST00000463916 DBN1Q16643 649 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 ZNF658BQ4V348 819 aaPredicted RBP12.7□□□□□ -0.38
XRN1-203ENST00000463916 DUS1LQ6P1R4 473 aaKnown RBP12.7□□□□□ -0.38
XRN1-203ENST00000463916 PDZD3Q86UT5 571 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 CFAP206Q8IYR0 622 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 RSC1A1Q92681 617 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 HDAC10Q969S8 669 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 CXorf40BQ96DE9 158 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 INSM2Q96T92 566 aaPredicted RBP12.7□□□□□ -0.38
XRN1-203ENST00000463916 DPYSL5Q9BPU6 564 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 WWP1Q9H0M0 922 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 POT1Q9NUX5 634 aa12.7□□□□□ -0.38
XRN1-203ENST00000463916 POLBP06746 335 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 RALBP11234 206 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ADRA1DP25100 572 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 FOXN2P32314 431 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 HALP42357 657 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 TERF1P54274 439 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 BASP1P80723 227 aaKnown RBP12.69□□□□□ -0.38
XRN1-203ENST00000463916 CLN3Q13286 438 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.38
XRN1-203ENST00000463916 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 BMPERQ8N8U9 685 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 AVL9Q8NBF6 648 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 RANBP9Q96S59 729 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 PRORYQ9H606 182 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 CPNE5Q9HCH3 593 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 TTC7AQ9ULT0 858 aaPredicted RBP12.69□□□□□ -0.38
XRN1-203ENST00000463916 PRSS21Q9Y6M0 314 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 HEATR9A2RTY3 570 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ZNF185O15231 689 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ZSCAN12O43309 604 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 LEPRP48357 1165 aaKnown RBP12.69□□□□□ -0.38
XRN1-203ENST00000463916 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
XRN1-203ENST00000463916 PPP1CAP62136 330 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ACVR1Q04771 509 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ZNF534Q76KX8 674 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ZFAND4Q86XD8 727 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 ART4Q93070 314 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 PBKQ96KB5 322 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 OSBPL9Q96SU4 736 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 EIF2B3Q9NR50 452 aaKnown RBP12.69□□□□□ -0.38
XRN1-203ENST00000463916 HOMER3Q9NSC5 361 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 IMP3Q9NV31 184 aaKnown RBP12.69□□□□□ -0.38
XRN1-203ENST00000463916 ACSL6Q9UKU0 697 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 TCAF1Q9Y4C2 921 aa12.69□□□□□ -0.38
XRN1-203ENST00000463916 MN1Q10571 1320 aaPredicted RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 CFAP99D6REC4 459 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 KIF1CO43896 1103 aaKnown RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 MTHFD1P11586 935 aaKnown RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 AMD1P17707 334 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 CSTF2P33240 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
XRN1-203ENST00000463916 VPS41P49754 854 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 SRSF6Q13247 344 aaKnown RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 CAPRIN2Q6IMN6 1127 aaKnown RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 FAM129CQ86XR2 697 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 HEXDCQ8WVB3 486 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 MAGOHBQ96A72 148 aaKnown RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 RMDN2Q96LZ7 410 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 EPB41L1Q9H4G0 881 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 AKAP7Q9P0M2 348 aaPredicted RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 ACSL5Q9ULC5 683 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 EFCAB7A8K855 629 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 CAPN5O15484 640 aaPredicted RBP12.68□□□□□ -0.38
XRN1-203ENST00000463916 EFSO43281 561 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 OR1I1O60431 355 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 GAS8O95995 478 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 C9P02748 559 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 PDHA2P29803 388 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 C4orf22Q6V702 233 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 PLXDC1Q8IUK5 500 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 HM13Q8TCT9 377 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 C9orf72Q96LT7 481 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 C12orf66Q96MD2 445 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 TGM7Q96PF1 710 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 NRTNQ99748 197 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 CCM2Q9BSQ5 444 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms