RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 PAK5Q9P286 719 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 SMG1Q96Q15 3661 aaKnown RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 CAPN5O15484 640 aaPredicted RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 SLC35G4P0C7Q5 338 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 LIPCP11150 499 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 ATP1B2P14415 290 aaPredicted RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 RPL22P35268 128 aaKnown RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 LEPRP48357 1165 aaKnown RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 ARSDP51689 593 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 UCNP55089 124 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 DMPKQ09013 629 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 CCNG2Q16589 344 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 ANKS6Q68DC2 871 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 IRGCQ6NXR0 463 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 CCDC81Q6ZN84 652 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 VASH2Q86V25 355 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 PLXDC1Q8IUK5 500 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 MAIP1Q8WWC4 291 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 TAAR9Q96RI9 348 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 EPB41L1Q9H4G0 881 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 SLC40A1Q9NP59 571 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 ZDHHC3Q9NYG2 299 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 SMARCAL1Q9NZC9 954 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 PCDHB11Q9Y5F2 797 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 B3GALT1Q9Y5Z6 326 aa17.61■□□□□ 0.41
LINC00960-201ENST00000463183 DNMT3AQ9Y6K1 912 aaPredicted RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 ZNF106Q9H2Y7 1883 aaKnown RBP17.61■□□□□ 0.41
LINC00960-201ENST00000463183 MGAQ8IWI9 3026 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 ERI2A8K979 691 aaKnown RBP17.6■□□□□ 0.41
LINC00960-201ENST00000463183 ACRV1P26436 265 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 VPS41P49754 854 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 SESN2P58004 480 aaPredicted RBP17.6■□□□□ 0.41
LINC00960-201ENST00000463183 CACNG1Q06432 222 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 SEMA5AQ13591 1074 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 KRT33BQ14525 404 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 TRIP13Q15645 432 aaPredicted RBP17.6■□□□□ 0.41
LINC00960-201ENST00000463183 SKIDA1Q1XH10 827 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 GPR33Q49SQ1 333 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 BCL7AQ4VC05 210 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 FAM92BQ6ZTR7 304 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 PIANPQ8IYJ0 282 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 CLDN19Q8N6F1 224 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 OR2L2Q8NH16 312 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 INSM2Q96T92 566 aaPredicted RBP17.6■□□□□ 0.41
LINC00960-201ENST00000463183 UCK1Q9HA47 277 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 SLC2A6Q9UGQ3 507 aa17.6■□□□□ 0.41
LINC00960-201ENST00000463183 HEATR9A2RTY3 570 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 CCDC162PA2VCL2 907 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 EIF4E1BA6NMX2 242 aaKnown RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 SGTAO43765 313 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 KIF1CO43896 1103 aaKnown RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 MTHFD1P11586 935 aaKnown RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 PRLHRP49683 370 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 FOXM1Q08050 763 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 DBN1Q16643 649 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 SOWAHCQ53LP3 525 aaPredicted RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 MANEAQ5SRI9 462 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 METRNLQ641Q3 311 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 ARHGAP22Q7Z5H3 698 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 RBM12BQ8IXT5 1001 aaKnown RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 HEXDCQ8WVB3 486 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 C9orf72Q96LT7 481 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 BBC3Q96PG8 261 aaPredicted RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 CCNL2Q96S94 520 aaPredicted RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 TRMT1Q9NXH9 659 aaKnown RBP17.59■□□□□ 0.41
LINC00960-201ENST00000463183 PDP2Q9P2J9 529 aa17.59■□□□□ 0.41
LINC00960-201ENST00000463183 MROH6A6NGR9 719 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 AGAP14A8MT82 685 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 H7C0S8 307 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 SUN1O94901 812 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 CAPZBP47756 277 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 PPP1CAP62136 330 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 VAC14Q08AM6 782 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 DCAF12Q5T6F0 453 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 KIAA1614Q5VZ46 1190 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 PPHLN1Q8NEY8 458 aaKnown RBP17.58■□□□□ 0.4
LINC00960-201ENST00000463183 OR6P1Q8NGX9 317 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 HM13Q8TCT9 377 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 HDAC10Q969S8 669 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 MS4A14Q96JA4 679 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 ELMO2Q96JJ3 720 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 RMDN2Q96LZ7 410 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 APMAPQ9HDC9 416 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 CASS4Q9NQ75 786 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 ACSL5Q9ULC5 683 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 TTC7AQ9ULT0 858 aaPredicted RBP17.58■□□□□ 0.4
LINC00960-201ENST00000463183 PRSS21Q9Y6M0 314 aa17.58■□□□□ 0.4
LINC00960-201ENST00000463183 MN1Q10571 1320 aaPredicted RBP17.57■□□□□ 0.4
LINC00960-201ENST00000463183 B4E171 279 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 STMND1H3BQB6 276 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 GOT2P00505 430 aaKnown RBP17.57■□□□□ 0.4
LINC00960-201ENST00000463183 ADRA1DP25100 572 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 TSPAN7P41732 249 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 PREPP48147 710 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 ARCN1P48444 511 aaKnown RBP17.57■□□□□ 0.4
LINC00960-201ENST00000463183 CRADDP78560 199 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 BRD3Q15059 726 aa17.57■□□□□ 0.4
LINC00960-201ENST00000463183 TSTD2Q5T7W7 516 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms