RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 UGT3A1Q6NUS8 523 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 RASGRP3Q8IV61 690 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 RGL4Q8IZJ4 473 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 PLD6Q8N2A8 252 aaKnown RBP14.1□□□□□ -0.15
COL6A1-202ENST00000463060 FAM136AQ96C01 138 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 FAM122AQ96E09 287 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 CABS1Q96KC9 395 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 STMN4Q9H169 189 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-202ENST00000463060 MIR1-1HGQ9H1L0 117 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 GPAMQ9HCL2 828 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 SSU72Q9NP77 194 aaKnown RBP14.1□□□□□ -0.15
COL6A1-202ENST00000463060 TM7SF3Q9NS93 570 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 SUFUQ9UMX1 484 aa14.1□□□□□ -0.15
COL6A1-202ENST00000463060 A0A087X1B8 175 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 KLHL33A6NCF5 533 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 E5RI56 91 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 GOLGA8RI6L899 631 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 EIF3FO00303 357 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 KCNJ13O60928 360 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 CSNK1EP49674 416 aaKnown RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 AFF3P51826 1226 aaKnown RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 NXPH1P58417 271 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 BNC1Q01954 994 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 PDAP1Q13442 181 aaKnown RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 MPP2Q14168 576 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 SIM2Q14190 667 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 INSCQ1MX18 579 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 CRTC3Q6UUV7 619 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 LAYNQ6UX15 382 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 NAPRTQ6XQN6 538 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 FAM83HQ6ZRV2 1179 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 CEP68Q76N32 757 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 TRAPPC5Q8IUR0 188 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 VRK3Q8IV63 474 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 C4orf33Q8N1A6 199 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 ZBTB2Q8N680 514 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 LILRA3Q8N6C8 439 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 EEF1AKMT1Q8WVE0 214 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 TSACCQ96A04 125 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 ALKBH8Q96BT7 664 aaKnown RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 PDXPQ96GD0 296 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 TIMM29Q9BSF4 260 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 TSSK1BQ9BXA7 367 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 CAAP1Q9H8G2 361 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 SYTL2Q9HCH5 934 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 SARS2Q9NP81 518 aaKnown RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 IGSF5Q9NSI5 407 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 ZNHIT2Q9UHR6 403 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 KLF15Q9UIH9 416 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 TRMT6Q9UJA5 497 aaKnown RBP14.09□□□□□ -0.15
COL6A1-202ENST00000463060 TLK1Q9UKI8 766 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 ANKRD6Q9Y2G4 727 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 SDK1Q7Z5N4 2213 aa14.09□□□□□ -0.15
COL6A1-202ENST00000463060 KNL1Q8NG31 2342 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 A0A1B0GTW7 788 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 PRR5-ARHGAP8B1AHC4 643 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 LIN7AO14910 233 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-202ENST00000463060 KLHL2O95198 593 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 TOP3BO95985 862 aaKnown RBP14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CSF2P04141 144 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 GSTA1P08263 222 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CCDC166P0CW27 439 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CBSLP0DN79 551 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CRHR1P34998 444 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 HOXD12P35452 270 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CBSP35520 551 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CLCNKAP51800 687 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 HK3P52790 923 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 ACSBG2Q5FVE4 666 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 METRNLQ641Q3 311 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CDHR3Q6ZTQ4 885 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 RAPH1Q70E73 1250 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 OTOAQ7RTW8 1153 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 LCA5Q86VQ0 697 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 AMZ2Q86W34 360 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 NRROSQ86YC3 692 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 GALNT13Q8IUC8 556 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 SYT12Q8IV01 421 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CPNE9Q8IYJ1 553 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 TMEM151AQ8N4L1 468 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 NKAPQ8N5F7 415 aaKnown RBP14.08□□□□□ -0.16
COL6A1-202ENST00000463060 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 HM13Q8TCT9 377 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 KCTD4Q8WVF5 259 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 ASZ1Q8WWH4 475 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 ELMO1Q92556 727 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 NXNL1Q96CM4 212 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 OR2M4Q96R27 311 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 VPS11Q9H270 941 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 CYP4F12Q9HCS2 524 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 PCMTD2Q9NV79 361 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 ZNF358Q9NW07 568 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 TRNAU1APQ9NX07 287 aaKnown RBP14.08□□□□□ -0.16
COL6A1-202ENST00000463060 KLQ9UEF7 1012 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 PLEKHM1Q9Y4G2 1056 aa14.08□□□□□ -0.16
COL6A1-202ENST00000463060 TARM1B6A8C7 271 aa14.07□□□□□ -0.16
COL6A1-202ENST00000463060 PRPF4O43172 522 aaKnown RBP eCLIP14.07□□□□□ -0.169e-6■□□□□ 10.5
COL6A1-202ENST00000463060 APOA4P06727 396 aa14.07□□□□□ -0.16
COL6A1-202ENST00000463060 BRAFP15056 766 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms