RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 VPS9D1Q9Y2B5 631 aa17.75■□□□□ 0.43
RER1-206ENST00000462129 SSUH2Q9Y2M2 353 aa17.75■□□□□ 0.43
RER1-206ENST00000462129 FAM169AQ9Y6X4 670 aa17.75■□□□□ 0.43
RER1-206ENST00000462129 PRSS38A1L453 326 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 BHMG1C9JSJ3 638 aaPredicted RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 GAPDHSO14556 408 aaPredicted RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 NDUFS3O75489 264 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 CDK14O94921 469 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 TUBBP07437 444 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 ACRV1P26436 265 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 FOXN2P32314 431 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 PHBP35232 272 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 SRP54P61011 504 aaKnown RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 ITIH4Q14624 930 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 RNF187Q5TA31 235 aaPredicted RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 NEPROQ6NW34 567 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 ZCCHC8Q6NZY4 707 aaKnown RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 GUSBP11Q6P575 273 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 UNC5AQ6ZN44 842 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 MARK2Q7KZI7 788 aaKnown RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 EFL1Q7Z2Z2 1120 aaKnown RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 KCNMB4Q86W47 210 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 SERPINA9Q86WD7 417 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 GALNT13Q8IUC8 556 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 ZNF548Q8NEK5 533 aaPredicted RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.74■□□□□ 0.43
RER1-206ENST00000462129 CDKL2Q92772 493 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 OR2AG1Q9H205 316 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 VPS37BQ9H9H4 285 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 CARS2Q9HA77 564 aaKnown RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 CYP4F12Q9HCS2 524 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 ARFGAP3Q9NP61 516 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 GPR27Q9NS67 375 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.74■□□□□ 0.43
RER1-206ENST00000462129 TMEM98Q9Y2Y6 226 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 ENTPD2Q9Y5L3 495 aa17.74■□□□□ 0.43
RER1-206ENST00000462129 HEMK1Q9Y5R4 338 aaPredicted RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 V9GYY5 206 aaPredicted RBP17.74■□□□□ 0.43
RER1-206ENST00000462129 PMS2P1A4D2B8 440 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 TMEM202A6NGA9 273 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 QSOX1O00391 747 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 GPR39O43194 453 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 ZNF7P17097 686 aaPredicted RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 JUNDP17535 347 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 OGNP20774 298 aaKnown RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 TNFRSF8P28908 595 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 TMEM115Q12893 351 aaPredicted RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 NFATC3Q12968 1075 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 CBLBQ13191 982 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 FZD2Q14332 565 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 FASTKD3Q14CZ7 662 aaKnown RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 ZNF470Q6ECI4 717 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 RBM44Q6ZP01 1051 aaKnown RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 TRAPPC5Q8IUR0 188 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 PHACTR4Q8IZ21 702 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 RBFAQ8N0V3 343 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 AGGF1Q8N302 714 aaeCLIP17.73■□□□□ 0.43
RER1-206ENST00000462129 CERS2Q96G23 380 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 ZNF514Q96K75 400 aaPredicted RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 TSSK1BQ9BXA7 367 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 FAM117AQ9C073 453 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 APOBEC3BQ9UH17 382 aaKnown RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 ZNHIT2Q9UHR6 403 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 CNOT6Q9ULM6 557 aaKnown RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 DOLKQ9UPQ8 538 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 PCDHGA8Q9Y5G5 932 aa17.73■□□□□ 0.43
RER1-206ENST00000462129 COL27A1Q8IZC6 1860 aaPredicted RBP17.73■□□□□ 0.43
RER1-206ENST00000462129 TRBV5-4A0A0C4DH59 114 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 ZCWPW2A0A1B0GU75 182 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 MTX2O75431 263 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 IVLP07476 585 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 VCLP18206 1134 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 STX2P32856 288 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 NSG1P42857 185 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 GNPDA1P46926 289 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 CSRP3P50461 194 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 HK3P52790 923 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 CLN3Q13286 438 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 DEFB133Q30KQ1 61 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 STEAP4Q687X5 459 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 C3orf62Q6ZUJ4 267 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 IGDCC3Q8IVU1 814 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 SCG3Q8WXD2 468 aaKnown RBP17.72■□□□□ 0.43
RER1-206ENST00000462129 TSACCQ96A04 125 aaPredicted RBP17.72■□□□□ 0.43
RER1-206ENST00000462129 GRAMD1AQ96CP6 724 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 PRR11Q96HE9 360 aaPredicted RBP17.72■□□□□ 0.43
RER1-206ENST00000462129 C9orf72Q96LT7 481 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 TCF12Q99081 682 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 TRIM56Q9BRZ2 755 aaKnown RBP17.72■□□□□ 0.43
RER1-206ENST00000462129 CLPBQ9H078 707 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 CCDC68Q9H2F9 335 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 FGF22Q9HCT0 170 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 RRAGDQ9NQL2 400 aaPredicted RBP17.72■□□□□ 0.43
RER1-206ENST00000462129 NSMCE4AQ9NXX6 385 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 ZFATQ9P243 1243 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 TXNDC16Q9P2K2 825 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 ATXN10Q9UBB4 475 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 SPASTQ9UBP0 616 aa17.72■□□□□ 0.43
RER1-206ENST00000462129 SUFUQ9UMX1 484 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms