RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 IFT81Q8WYA0 676 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 DNAJC1Q96KC8 554 aaKnown RBP12.62□□□□□ -0.39
SHISA5-211ENST00000460758 KIFC1Q9BW19 673 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 FAM129AQ9BZQ8 928 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 MRM3Q9HC36 420 aaKnown RBP12.62□□□□□ -0.39
SHISA5-211ENST00000460758 TRIM39Q9HCM9 518 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
SHISA5-211ENST00000460758 SAMD15Q9P1V8 674 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 RIMKLBQ9ULI2 386 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 LOXL2Q9Y4K0 774 aa12.62□□□□□ -0.39
SHISA5-211ENST00000460758 IGHV1OR21-1A0A087WYE8 117 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PRR19A6NJB7 356 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 GPR89AB7ZAQ6 455 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 E7ESA3 106 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 GAPDHSO14556 408 aaPredicted RBP12.61□□□□□ -0.39
SHISA5-211ENST00000460758 ZW10O43264 779 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 GPR89BP0CG08 455 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 F3P13726 295 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PSMA3P25788 255 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 ECHS1P30084 290 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 CA5AP35218 305 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 SPAM1P38567 509 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 ETV5P41161 510 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 TMPRSS15P98073 1019 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 CFHR1Q03591 330 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
SHISA5-211ENST00000460758 CBLBQ13191 982 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 BIRC2Q13490 618 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PHF19Q5T6S3 580 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 ZDHHC20Q5W0Z9 365 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 IYDQ6PHW0 289 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 USP53Q70EK8 1073 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PIM3Q86V86 326 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PEX13Q92968 403 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 STAMBPL1Q96FJ0 436 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 CCDC74BQ96LY2 380 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 FCRL3Q96P31 734 aaPredicted RBP12.61□□□□□ -0.39
SHISA5-211ENST00000460758 BBC3Q96PG8 261 aaPredicted RBP12.61□□□□□ -0.39
SHISA5-211ENST00000460758 C19orf43Q9BQ61 176 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 ANKZF1Q9H8Y5 726 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 IL26Q9NPH9 171 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PRDM8Q9NQV8 689 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 TMEM9Q9P0T7 183 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PISDQ9UG56 409 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 SLC23A2Q9UGH3 650 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.61□□□□□ -0.39
SHISA5-211ENST00000460758 FKBPLQ9UIM3 349 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 MAD1L1Q9Y6D9 718 aa12.61□□□□□ -0.39
SHISA5-211ENST00000460758 V9GYY5 206 aaPredicted RBP12.61□□□□□ -0.39
SHISA5-211ENST00000460758 PIKFYVEQ9Y2I7 2098 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 IGHV5-10-1A0A0J9YXX1 117 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 FAM237BA0A1B0GVD1 139 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 CCL22O00626 93 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 KLK10O43240 276 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SNX2O60749 519 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 JMJD7P0C870 316 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 NMBRP28336 390 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SLC5A2P31639 672 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 HADHAP40939 763 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 ELK3P41970 407 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 ARSDP51689 593 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 CLCNKAP51800 687 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 HHEXQ03014 270 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 ACVR1Q04771 509 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 CHRNA6Q15825 494 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SKIDA1Q1XH10 827 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SOWAHCQ53LP3 525 aaPredicted RBP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 FAM151BQ6UXP7 276 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 CENPUQ71F23 418 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 LRRTM4Q86VH4 590 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 RCBTB1Q8NDN9 531 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 DTX3LQ8TDB6 740 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 TMEM159Q96B96 161 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 LRRC39Q96DD0 335 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 CDKN2AIPNLQ96HQ2 116 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 TRIM56Q9BRZ2 755 aaKnown RBP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 TIMM29Q9BSF4 260 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SARS2Q9NP81 518 aaKnown RBP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SAYSD1Q9NPB0 183 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 KLC4Q9NSK0 619 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 KCNK4Q9NYG8 393 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 MTRF1LQ9UGC7 380 aaKnown RBP12.6□□□□□ -0.39
SHISA5-211ENST00000460758 NFU1Q9UMS0 254 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 PCDHGA7Q9Y5G6 932 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 MGAQ8IWI9 3026 aa12.6□□□□□ -0.39
SHISA5-211ENST00000460758 GLYATL1P3A0A0U1RQE8 302 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms