RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 FAM171BQ6P995 826 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 SZRD1Q7Z422 152 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 TAC4Q86UU9 113 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 ZDHHC14Q8IZN3 488 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 CPSF7Q8N684 471 aaKnown RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 DNAJB14Q8TBM8 379 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 SPPL2AQ8TCT8 520 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 NDRG1Q92597 394 aaKnown RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 PGAP3Q96FM1 320 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 APOL2Q9BQE5 337 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 WDR55Q9H6Y2 383 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 MKS1Q9NXB0 559 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 DTLQ9NZJ0 730 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 MLXQ9UH92 298 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 PNMA8BQ9ULN7 279 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 LCTP09848 1927 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 TRPM7Q96QT4 1865 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 C2orf81A6NN90 581 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 KPNA3O00505 521 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ENPP3O14638 875 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 NRP1O14786 923 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 AZIN1O14977 448 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 AXIN1O15169 862 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 HTRA2O43464 458 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 MFSD11O43934 449 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 APOL3O95236 402 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 MT-CO1P00395 513 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 CDH1P12830 882 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF37AP17032 561 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SYN1P17600 705 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 LAG3P18627 525 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PRKACBP22694 351 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 IVDP26440 423 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ATP5C1P36542 298 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 IFNGR2P38484 337 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 STARP49675 285 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SCAPQ12770 1279 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 IL23RQ5VWK5 629 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 GLYATQ6IB77 296 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ERICH5Q6P6B1 374 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 DDX53Q86TM3 631 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 EPHX4Q8IUS5 362 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 MMAAQ8IVH4 418 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PQLC3Q8N755 202 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 GAB3Q8WWW8 586 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ZUFSPQ96AP4 578 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 REXO5Q96IC2 774 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF717Q9BY31 904 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ZYG11BQ9C0D3 744 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SLC6A15Q9H2J7 730 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 GPN1Q9HCN4 374 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 XPR1Q9UBH6 696 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 DNAJB9Q9UBS3 223 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 DNMT3LQ9UJW3 386 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SCML2Q9UQR0 700 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 MRPS17Q9Y2R5 130 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 TRAF6Q9Y4K3 522 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 BHMG1C9JSJ3 638 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 IRAK2O43187 625 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PMPCBO75439 489 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SLC22A3O75751 556 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 OAZ2O95190 189 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 GUCA1CO95843 209 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 RAP2AP10114 183 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 XRCC1P18887 633 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 TFEBP19484 476 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 CCNCP24863 283 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PTX3P26022 381 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SLC15A1P46059 708 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 RPL34P49207 117 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 LIMK2P53671 638 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 EEFSECP57772 596 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 RALGDSQ12967 914 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 MAB21L1Q13394 359 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 KRT33BQ14525 404 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 STARD3Q14849 445 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 CARTPTQ16568 116 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PABPC1LQ4VXU2 614 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 SYPL2Q5VXT5 272 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 NCBP2-AS2Q69YL0 99 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 TIFABQ6ZNK6 161 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 DCDC5Q6ZRR9 648 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 CUZD1Q86UP6 607 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 GPR180Q86V85 440 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 OFCC1Q8IZS5 231 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 OR5K1Q8NHB7 308 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 STAG3L4Q8TBR4 150 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PABPC5Q96DU9 382 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 CRELD1Q96HD1 420 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 PIWIL1Q96J94 861 aaKnown RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 BTN2A3PQ96KV6 586 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 FCRL2Q96LA5 508 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 LGMNQ99538 433 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 MIPEPQ99797 713 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 C11orf84Q9BUA3 381 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-202ENST00000460333 TAS2R13Q9NYV9 303 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 EGFL7Q9UHF1 273 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 A0A088AWK7 358 aa6.12□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms