RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TBCELQ5QJ74 424 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 CAPSLQ8WWF8 208 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 COQ10BQ9H8M1 238 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 UBFD1O14562 309 aaKnown RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 FKTNO75072 461 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 PAPSS2O95340 614 aaPredicted RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 IL10P22301 178 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 HOXD9P28356 352 aaPredicted RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 RGS4P49798 205 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 FAM189BP81408 668 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 RING1Q06587 406 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 DDX39BQ13838 428 aaKnown RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 BOP1Q14137 746 aaKnown RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 C18orf21Q32NC0 220 aaPredicted RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 FAM26DQ5JW98 314 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 PEX5LQ8IYB4 626 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 NKAPQ8N5F7 415 aaKnown RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 TBC1D15Q8TC07 691 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 MRPL40Q9NQ50 206 aaKnown RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 VPS9D1Q9Y2B5 631 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 LOC285095A0A1B0GVY8 99 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 A0A1W2PRU2 124 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 NOTOA8MTQ0 251 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CACNG3O60359 315 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 SLC25A14O95258 325 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CYBBP04839 570 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CKMT2P17540 419 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 ITGALP20701 1170 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 HSPA7P48741 367 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 GALNT18Q6P9A2 607 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 SLC15A4Q8N697 577 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 IGSF21Q96ID5 467 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 TRMOQ9BU70 441 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 THUMPD3Q9BV44 507 aaKnown RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 C2orf49Q9BVC5 232 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 GSTO2Q9H4Y5 243 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 ZFYVE1Q9HBF4 777 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CD84Q9UIB8 345 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 RIMS3Q9UJD0 308 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 POU2F3Q9UKI9 436 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 SDK1Q7Z5N4 2213 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 SCN4AP35499 1836 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 TRIM64CA6NLI5 447 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 DRGXA6NNA5 263 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 WASH4PA8MWX3 477 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 GSTA4O15217 222 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CLDN7O95471 211 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 NCK1P16333 377 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF7P17097 686 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 NRG1Q02297 640 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 TRIM25Q14258 630 aaKnown RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 TAF1AQ15573 450 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 MOGQ16653 247 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 NDUFA5Q16718 116 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 PHKG1Q16816 387 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 ATP6AP1LQ52LC2 224 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 SAMD4BQ5PRF9 694 aaKnown RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 RALGPS2Q86X27 583 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-203ENST00000460265 KIAA2013Q8IYS2 634 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CYGBQ8WWM9 190 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 ZDHHC6Q9H6R6 413 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 TLR9Q9NR96 1032 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 CACNA2D2Q9NY47 1150 aa15.21■□□□□ 0.03
LMNB1-203ENST00000460265 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 ILVBLA1L0T0 632 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 KDELR3O43731 214 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 LCP2Q13094 533 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 AARS2Q5JTZ9 985 aaKnown RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 CLHC1Q8NHS4 586 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 NCLNQ969V3 563 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 KLQ9UEF7 1012 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 SLC8A2Q9UPR5 921 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 CCDC154A6NI56 674 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 TMEM189-UBE2V1I3L0A0 370 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 GNGT2O14610 69 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 PRMT5O14744 637 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 SMARCB1Q12824 385 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 CYP51A1Q16850 503 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 LHX8Q68G74 356 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 VASH1Q7L8A9 365 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 ELMOD1Q8N336 334 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 MYLIPQ8WY64 445 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 PPM1MQ96MI6 270 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 SLC30A3Q99726 388 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 CLSTN3Q9BQT9 956 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 HERC2P3Q9BVR0 1158 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 OSBPL11Q9BXB4 747 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 TDRD15B5MCY1 1934 aaKnown RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 C7orf72A4D263 438 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 SMAD6O43541 496 aaKnown RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 ZNF182P17025 639 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 CD247P20963 164 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 CPSF6Q16630 551 aaKnown RBP eCLIP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 TRIM60Q495X7 471 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 OTUD3Q5T2D3 398 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 TMEM26Q6ZUK4 368 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 GPRIN3Q6ZVF9 776 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms