RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 VPS37BQ9H9H4 285 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 FAM114A2Q9NRY5 505 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 NCKIPSDQ9NZQ3 722 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 PSMD13Q9UNM6 376 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 WDR37Q9Y2I8 494 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 RNF215Q9Y6U7 377 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 EME2A4GXA9 379 aaPredicted RBP12.58□□□□□ -0.4
COL18A1-206ENST00000459895 OR52A4PA6NMU1 304 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 IQCF5A8MTL0 148 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 QSOX1O00391 747 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 NIPSNAP2O75323 286 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 NDUFS3O75489 264 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 FTH1P02794 183 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 OR56A5P0C7T3 313 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.47e-12■■□□□ 12.8
COL18A1-206ENST00000459895 PMLP29590 882 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 CARSP49589 748 aaKnown RBP12.58□□□□□ -0.4
COL18A1-206ENST00000459895 UBE2IP63279 158 aaKnown RBP12.58□□□□□ -0.4
COL18A1-206ENST00000459895 SYTL3Q4VX76 610 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 OGFOD3Q6PK18 319 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 SLCO6A1Q86UG4 719 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
COL18A1-206ENST00000459895 CCNJLQ8IV13 435 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 NAT6Q93015 286 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 C9orf72Q96LT7 481 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 BIRC8Q96P09 236 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 FMO2Q99518 471 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 TTC1Q99614 292 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 CCM2Q9BSQ5 444 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 WWP1Q9H0M0 922 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 INTS10Q9NVR2 710 aaKnown RBP12.58□□□□□ -0.4
COL18A1-206ENST00000459895 PADI4Q9UM07 663 aa12.58□□□□□ -0.4
COL18A1-206ENST00000459895 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 S1PR4O95977 384 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SLC35G4P0C7Q5 338 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 IDSP22304 550 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SSTR1P30872 391 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 PPARGP37231 505 aaPredicted RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 FASLGP48023 281 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 RPIAP49247 311 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 GPX6P59796 221 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 FRG1Q14331 258 aaKnown RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 AGAP9Q5VTM2 703 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 DHRS13Q6UX07 377 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 ZNF438Q7Z4V0 828 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SPRED1Q7Z699 444 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SPNS2Q8IVW8 549 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 LMNTD2Q8IXW0 634 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 C2CD4AQ8NCU7 369 aaPredicted RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 CALML6Q8TD86 181 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 PYROXD1Q8WU10 500 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 IFT81Q8WYA0 676 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 ELMO1Q92556 727 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 CCDC3Q9BQI4 270 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 FOXP3Q9BZS1 431 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 OR52A5Q9H2C5 316 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 SYNDIG1Q9H7V2 258 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 EVA1BQ9NVM1 165 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 FBXO5Q9UKT4 447 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 CRYL1Q9Y2S2 319 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 PSAT1Q9Y617 370 aa12.57□□□□□ -0.4
COL18A1-206ENST00000459895 CFAP20Q9Y6A4 193 aaKnown RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 DNMT3AQ9Y6K1 912 aaPredicted RBP12.57□□□□□ -0.4
COL18A1-206ENST00000459895 KIR2DS5A0A0G2JLQ3 304 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 PRAMEF33A0A0G2JMD5 474 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 A0A0G2JNG1 304 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 TCRBV9S1A1TA0A576 114 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 KIR2DS3K7RE56 304 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 PIAS1O75925 651 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 GP1BAP07359 652 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 SLC2A4P14672 509 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 GLB1P16278 677 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 PDHA2P29803 388 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 FMO4P31512 558 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 CCR7P32248 378 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 MAGEA4P43358 317 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 DUSP3P51452 185 aaPredicted RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 CSE1LP55060 971 aaKnown RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 ADARP55265 1226 aaKnown RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 HHEXQ03014 270 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 CUL1Q13616 776 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 KIR2DS5Q14953 304 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 NR1D2Q14995 579 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 CLCA4Q14CN2 919 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 EFTUD2Q15029 972 aaKnown RBP eCLIP12.56□□□□□ -0.43e-9■■■■■ 42.8
COL18A1-206ENST00000459895 BRD3Q15059 726 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 N4BP2L1Q5TBK1 243 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms