RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	NRTN	Q99748	197 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	WWP1	Q9H0M0	922 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	OR52A5	Q9H2C5	316 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	COG4	Q9H9E3	785 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	SARS2	Q9NP81	518 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	WASH6P	Q9NQA3	447 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	ZDHHC18	Q9NUE0	388 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	NCKIPSD	Q9NZQ3	722 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	SAMD15	Q9P1V8	674 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	GALP	Q9UBC7	116 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CPNE7	Q9UBL6	633 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CDYL	Q9Y232	598 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	MED16	Q9Y2X0	877 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CFAP20	Q9Y6A4	193 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	GOLGA4	Q13439	2230 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	SLC5A10	A0PJK1	596 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	MAGEB16	A2A368	324 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	PMS2P1	A4D2B8	440 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	FAM221B	A6H8Z2	402 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	AP2A2	O94973	939 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	MT-CO3	P00414	261 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	C1QA	P02745	245 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	RPLP0	P05388	317 aa	Known RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	POLB	P06746	335 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ERVK-10	P10266	1014 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	RALB	P11234	206 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ITGB6	P18564	788 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	XRCC1	P18887	633 aa	Predicted RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	IDS	P22304	550 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	GABRB3	P28472	473 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CD1C	P29017	333 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ECHS1	P30084	290 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CCR7	P32248	378 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	SLC1A2	P43004	574 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ARL4C	P56559	192 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	SHC2	P98077	582 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	MPP1	Q00013	466 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	PDIA2	Q13087	525 aa	Known RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CTBP1	Q13363	440 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	RPE65	Q16518	533 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	HSP90AA5P	Q58FG0	334 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	DNAJC21	Q5F1R6	531 aa	Known RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	NKAIN2	Q5VXU1	208 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ZNF470	Q6ECI4	717 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	C8orf74	Q6P047	294 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ZNF549	Q6P9A3	640 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CERS6	Q6ZMG9	384 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	B3GNT8	Q7Z7M8	397 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CCNJL	Q8IV13	435 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	VRK3	Q8IV63	474 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	PDIK1L	Q8N165	341 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	DCBLD1	Q8N8Z6	715 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	MAPK15	Q8TD08	544 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	JPH3	Q8WXH2	748 aa	Predicted RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	GLMN	Q92990	594 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CFAP36	Q96G28	342 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CCM2	Q9BSQ5	444 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	CARD6	Q9BX69	1037 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	TBC1D10A	Q9BXI6	508 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	OGFR	Q9NZT2	677 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	RALY	Q9UKM9	306 aa	Known RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	PCDHB1	Q9Y5F3	818 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	SPEG	Q15772	3267 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	RP1	P56715	2156 aa		10.05	□□□□□ -0.8
MRPL55-223	ENST00000459783	IGHV1OR21-1	A0A087WYE8	117 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	KIR2DS5	A0A0G2JLQ3	304 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783		A0A0G2JNG1	304 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	C17orf113	A0A1B0GUU1	675 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	CTAGE15	A4D2H0	777 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783		D6RAR5	112 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	KIR2DS3	K7RE56	304 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	SMAP	O00193	183 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	PRMT5	O14744	637 aa	Predicted RBP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	KCNJ13	O60928	360 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	NIPSNAP2	O75323	286 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	PIAS1	O75925	651 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	TRIM16	O95361	564 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	CTAGE8	P0CG41	777 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	HOXB3	P14651	431 aa	Predicted RBP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	PNLIP	P16233	465 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	OGN	P20774	298 aa	Known RBP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	RPS3	P23396	243 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	ABCG1	P45844	678 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	TTPA	P49638	278 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	PLTP	P55058	493 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	EIF3B	P55884	814 aa	Known RBP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	E2F1	Q01094	437 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	HHEX	Q03014	270 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	TUBB2A	Q13885	445 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	KIR2DS5	Q14953	304 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	BRD3	Q15059	726 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	LONRF1	Q17RB8	773 aa		10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	AARS2	Q5JTZ9	985 aa	Known RBP	10.04	□□□□□ -0.8
MRPL55-223	ENST00000459783	LYPLAL1	Q5VWZ2	237 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms