RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MRNIPQ6NTE8 343 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 KLHL35Q6PF15 583 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 WDR74Q6RFH5 385 aaPredicted RBP15.83■□□□□ 0.12
CD28-203ENST00000458610 IGF2-ASQ6U949 168 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 ZNF534Q76KX8 674 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 RAB11FIP2Q7L804 512 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 CAND1Q86VP6 1230 aaKnown RBP15.83■□□□□ 0.12
CD28-203ENST00000458610 HOOK3Q86VS8 718 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 PLXDC1Q8IUK5 500 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 FBXO39Q8N4B4 442 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 NAT8LQ8N9F0 302 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 ZNF578Q96N58 590 aaPredicted RBP15.83■□□□□ 0.12
CD28-203ENST00000458610 SLC40A1Q9NP59 571 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 SYBUQ9NX95 663 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 FAM237BA0A1B0GVD1 139 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 DNALI1O14645 258 aaPredicted RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 LIN7AO14910 233 aaPredicted RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 HGSO14964 777 aaPredicted RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 SGTAO43765 313 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 NDUFS3O75489 264 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 DXOO77932 396 aaKnown RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 TUBB4AP04350 444 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 MPOP05164 745 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 NMBRP28336 390 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 PTGIRP43119 386 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 CD151P48509 253 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 LIMK2P53671 638 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 ERVPABLB-1P60509 514 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 CLCA4Q14CN2 919 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 RPE65Q16518 533 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 C3orf38Q5JPI3 329 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 RNASEH2BQ5TBB1 312 aaKnown RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 NKAIN2Q5VXU1 208 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 ANKRD22Q5VYY1 191 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 SYT10Q6XYQ8 523 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 FAM83HQ6ZRV2 1179 aaPredicted RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 LRRC6Q86X45 466 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 PROSER1Q86XN7 944 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 CLDN19Q8N6F1 224 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 OTUD6BQ8N6M0 293 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 GABPB2Q8TAK5 448 aaPredicted RBP15.82■□□□□ 0.12
CD28-203ENST00000458610 MDM1Q8TC05 714 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 NCSTNQ92542 709 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 SERPINB12Q96P63 405 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 TCF12Q99081 682 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 FOXP3Q9BZS1 431 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 WWP1Q9H0M0 922 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 RDH14Q9HBH5 336 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 THSD1Q9NS62 852 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 PSMD13Q9UNM6 376 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 SATB2Q9UPW6 733 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 VPS9D1Q9Y2B5 631 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 WDR37Q9Y2I8 494 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 PLXNB3Q9ULL4 1909 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 RP1P56715 2156 aa15.82■□□□□ 0.12
CD28-203ENST00000458610 OR52A4PA6NMU1 304 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 GOLGA8MH3BSY2 632 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 PLD2O14939 933 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 AVILO75366 819 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 TMEM63AO94886 807 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 UBXN7O94888 489 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 VAPBO95292 243 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 CAPNS1P04632 268 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 JMJD7P0C870 316 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 PRSS56P0CW18 603 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 MTHFD1P11586 935 aaKnown RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 MAPK9P45984 424 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 PDX1P52945 283 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 DNAJC21Q5F1R6 531 aaKnown RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 RNF187Q5TA31 235 aaPredicted RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 KIAA0930Q6ICG6 404 aaPredicted RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 MAATS1Q7Z4T9 603 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 B3GNT8Q7Z7M8 397 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 ZNF761Q86XN6 746 aaPredicted RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 SLITRK4Q8IW52 837 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 BBOF1Q8ND07 529 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 FGF11Q92914 225 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 TRIM44Q96DX7 344 aaPredicted RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 MFSD3Q96ES6 412 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 C12orf66Q96MD2 445 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 NUDT22Q9BRQ3 303 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 NAT9Q9BTE0 207 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 COG4Q9H9E3 785 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 IMP3Q9NV31 184 aaKnown RBP15.81■□□□□ 0.12
CD28-203ENST00000458610 FAM8A1Q9UBU6 413 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 ZMIZ1Q9ULJ6 1067 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 MAD1L1Q9Y6D9 718 aa15.81■□□□□ 0.12
CD28-203ENST00000458610 IGHV5-10-1A0A0J9YXX1 117 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 PRMT5O14744 637 aaPredicted RBP15.8■□□□□ 0.12
CD28-203ENST00000458610 KPNA5O15131 536 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 BRINP1O60477 761 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 CSTF2P33240 577 aaKnown RBP eCLIP15.8■□□□□ 0.12
CD28-203ENST00000458610 THOC5Q13769 683 aaKnown RBP15.8■□□□□ 0.12
CD28-203ENST00000458610 MORF4L2Q15014 288 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 IZUMO3Q5VZ72 239 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 CAPRIN2Q6IMN6 1127 aaKnown RBP15.8■□□□□ 0.12
CD28-203ENST00000458610 FOXR1Q6PIV2 292 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 LMNTD2Q8IXW0 634 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 C17orf53Q8N3J3 647 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms