RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 TMEM71Q6P5X7 295 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 CES3Q6UWW8 571 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 ABRAXAS1Q6UWZ7 409 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 SPDYE1Q8NFV5 336 aaPredicted RBP18.31■□□□□ 0.52
USP39-209ENST00000458268 OR4D9Q8NGE8 314 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 OR13J1Q8NGT2 312 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 HEXDCQ8WVB3 486 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 KCNE4Q8WWG9 221 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 CRELD1Q96HD1 420 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 RANBP9Q96S59 729 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 CHRAC1Q9NRG0 131 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 SYBUQ9NX95 663 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.31■□□□□ 0.52
USP39-209ENST00000458268 ANAPC5Q9UJX4 755 aa18.31■□□□□ 0.52
USP39-209ENST00000458268 DNMT3AQ9Y6K1 912 aaPredicted RBP18.31■□□□□ 0.52
USP39-209ENST00000458268 WDFY3Q8IZQ1 3526 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 TRBV5-4A0A0C4DH59 114 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 LILRA5A6NI73 299 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 UBXN7O94888 489 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 ITGA2BP08514 1039 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 CCL4P13236 92 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 ITGB6P18564 788 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 FOXN2P32314 431 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 EPHA4P54764 986 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 GFERP55789 205 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 DMPKQ09013 629 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 PPP1R7Q15435 360 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 PCID2Q5JVF3 399 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 IRGCQ6NXR0 463 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 CASC4Q6P4E1 433 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 LDB1Q86U70 411 aaPredicted RBP18.3■□□□□ 0.52
USP39-209ENST00000458268 ZNF248Q8NDW4 579 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 OR2L2Q8NH16 312 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 SNIP1Q8TAD8 396 aaKnown RBP18.3■□□□□ 0.52
USP39-209ENST00000458268 HM13Q8TCT9 377 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 RSC1A1Q92681 617 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 USP7Q93009 1102 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 TGM7Q96PF1 710 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 INSM2Q96T92 566 aaPredicted RBP18.3■□□□□ 0.52
USP39-209ENST00000458268 VPS37BQ9H9H4 285 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 LHX6Q9UPM6 363 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 PRSS21Q9Y6M0 314 aa18.3■□□□□ 0.52
USP39-209ENST00000458268 PRR19A6NJB7 356 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 EFCAB7A8K855 629 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 AGAP14A8MT82 685 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 KLK10O43240 276 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 SGTAO43765 313 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 RASSF9O75901 435 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 THRAP10827 490 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 MTHFD1P11586 935 aaKnown RBP18.29■□□□□ 0.52
USP39-209ENST00000458268 TPSB2P20231 275 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 NMBRP28336 390 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 SLC5A2P31639 672 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 PREPP48147 710 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 CSE1LP55060 971 aaKnown RBP18.29■□□□□ 0.52
USP39-209ENST00000458268 ERVPABLB-1P60509 514 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 SARNPP82979 210 aaKnown RBP18.29■□□□□ 0.52
USP39-209ENST00000458268 TPSAB1Q15661 275 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 SYTL3Q4VX76 610 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 ANKRD22Q5VYY1 191 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 ZNF449Q6P9G9 518 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 WASH2PQ6VEQ5 465 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 NAPRTQ6XQN6 538 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 NLRP9Q7RTR0 991 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 C17orf53Q8N3J3 647 aaPredicted RBP18.29■□□□□ 0.52
USP39-209ENST00000458268 OR4L1Q8NH43 312 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 ACTRT1Q8TDG2 376 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 GRK7Q8WTQ7 553 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 RNF31Q96EP0 1072 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 RMDN2Q96LZ7 410 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 TTC1Q99614 292 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 NAPGQ99747 312 aaPredicted RBP18.29■□□□□ 0.52
USP39-209ENST00000458268 DPYSL5Q9BPU6 564 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 CCM2Q9BSQ5 444 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 DDX47Q9H0S4 455 aaKnown RBP18.29■□□□□ 0.52
USP39-209ENST00000458268 WASH6PQ9NQA3 447 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 CATSPERZQ9NTU4 200 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.29■□□□□ 0.522e-8■■■□□ 16.1
USP39-209ENST00000458268 BPTFQ12830 3046 aa18.29■□□□□ 0.52
USP39-209ENST00000458268 OR1I1O60431 355 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 PRAMEF10O60809 474 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 AVILO75366 819 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 DXOO77932 396 aaKnown RBP18.28■□□□□ 0.52
USP39-209ENST00000458268 TCP1P17987 556 aaKnown RBP18.28■□□□□ 0.52
USP39-209ENST00000458268 NPY2RP49146 381 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 SEPHS1P49903 392 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 BOP1Q14137 746 aaKnown RBP18.28■□□□□ 0.52
USP39-209ENST00000458268 KCNJ11Q14654 390 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 CLPPQ16740 277 aaPredicted RBP18.28■□□□□ 0.52
USP39-209ENST00000458268 METRNLQ641Q3 311 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 KLHL7Q8IXQ5 586 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 AGBL5Q8NDL9 886 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 ELMO1Q92556 727 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 ART4Q93070 314 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 C19orf43Q9BQ61 176 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 IL22Q9GZX6 179 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 COG4Q9H9E3 785 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 SLC40A1Q9NP59 571 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 ASIC3Q9UHC3 531 aa18.28■□□□□ 0.52
USP39-209ENST00000458268 ACSL5Q9ULC5 683 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms