RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ACVR1Q04771 509 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 XKR7Q5GH72 579 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 VARS2Q5ST30 1063 aaKnown RBP19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 FAM171A1Q5VUB5 890 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 DLEU7Q6UYE1 221 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 BEND5Q7L4P6 421 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 SCML4Q8N228 414 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 SLC22A17Q8WUG5 538 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 SDCCAG3Q96C92 435 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 PTPRDP23468 1912 aa19.31■□□□□ 0.68
CNEP1R1-203ENST00000458059 NLRC5Q86WI3 1866 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 UPK1AO00322 258 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 HS6ST1O60243 411 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 TLR5O60602 858 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 PRAMEF12O95522 483 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 CST1P01037 141 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 CYP4B1P13584 511 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 OGNP20774 298 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 EMX2Q04743 252 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 DAG1Q14118 895 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 FAM174BQ3ZCQ3 159 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GRAMD4Q6IC98 578 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 FAM117BQ6P1L5 589 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GALNT5Q7Z7M9 940 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 PTRH1Q86Y79 214 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 CENPSQ8N2Z9 138 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 CLDN19Q8N6F1 224 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 CD200R1Q8TD46 325 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 FRS2Q8WU20 508 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GFM2Q969S9 779 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 RIC8BQ9NVN3 520 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 ZNHIT2Q9UHR6 403 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 DICER1Q9UPY3 1922 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 FAM234BA2RU67 622 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 TRIM64CA6NLI5 447 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 E2F6O75461 281 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GMNNO75496 209 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 FUCA1P04066 466 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 SGSHP51688 502 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 EEFSECP57772 596 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 TYSND1Q2T9J0 566 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 PERM1Q5SV97 790 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GCNT7Q6ZNI0 430 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 MRPL10Q7Z7H8 261 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GALNT7Q86SF2 657 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 SERINC5Q86VE9 423 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 ANKRD46Q86W74 232 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 ZFAND4Q86XD8 727 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 ZDHHC13Q8IUH4 622 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 CROCCP3Q8IVE0 287 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 GPR150Q8NGU9 434 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 FBXO44Q9H4M3 255 aa19.3■□□□□ 0.68
CNEP1R1-203ENST00000458059 C2orf81A6NN90 581 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 F5H5T6 163 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 G3V2T6 193 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 STX7O15400 261 aaKnown RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 DEAF1O75398 565 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 PRR35P0CG20 571 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 HOXD9P28356 352 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 PARP15Q460N3 678 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 AFTPHQ6ULP2 937 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 DENND1CQ8IV53 801 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 BORCS5Q969J3 196 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 SCUBE2Q9NQ36 999 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 NLE1Q9NVX2 485 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ADGRE2Q9UHX3 823 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 XPNPEP2O43895 674 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ANXA6P08133 673 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ENO2P09104 434 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 FOXM1Q08050 763 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 TRIP4Q15650 581 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 FAM98BQ52LJ0 330 aaKnown RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 MBOAT1Q6ZNC8 495 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 RBM23Q86U06 439 aaKnown RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 EGFL8Q99944 293 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 PFDN4Q9NQP4 134 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 TRNAU1APQ9NX07 287 aaKnown RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 UBA2Q9UBT2 640 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 COQ6Q9Y2Z9 468 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 PCDHB3Q9Y5E6 796 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 VPS4BO75351 444 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 MLYCDO95822 493 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ALPLP05186 524 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 AKR1A1P14550 325 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 HOXC8P31273 242 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 PLA2G16P53816 162 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 DUSP4Q13115 394 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ZNF829Q3KNS6 432 aaPredicted RBP19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ZNF773Q6PK81 442 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 USP51Q70EK9 711 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 GALNT10Q86SR1 603 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 SLC22A15Q8IZD6 547 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 OR2T12Q8NG77 320 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 BPIFB1Q8TDL5 484 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 ADAMTS16Q8TE57 1224 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 FAM162AQ96A26 154 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 TADA1Q96BN2 335 aa19.29■□□□□ 0.68
CNEP1R1-203ENST00000458059 GKN1Q9NS71 199 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms