RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SUFUQ9UMX1 484 aa5.21□□□□□ -1.58
HMGB1P4-201ENST00000455362 DRG1Q9Y295 367 aaKnown RBP5.21□□□□□ -1.58
HMGB1P4-201ENST00000455362 MYOFQ9NZM1 2061 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SHROOM3Q8TF72 1996 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 A0A1W2PQ09 198 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 TARSL2A2RTX5 802 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM72CH0Y354 149 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 DYNC1I1O14576 645 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 MSTNO14793 375 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 PER2O15055 1255 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZSCAN9O15535 394 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 MSI1O43347 362 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 COCHO43405 550 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 RAD51CO43502 376 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 LIASO43766 372 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 TULP3O75386 442 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 CSPG5O95196 566 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 METTL18O95568 372 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 IGLV3-27P01718 113 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 C8AP07357 584 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 TUBBP07437 444 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC2A3P11169 496 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 GOT1P17174 413 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SAT1P21673 171 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 PRKCHP24723 683 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ITGB7P26010 798 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 CCR1P32246 355 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ATP5C1P36542 298 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 KCNJ1P48048 391 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FNTAP49354 379 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZNF135P52742 658 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 RAD23AP54725 363 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 DYNLT1P63172 113 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 TBL3Q12788 808 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 EIF2B5Q13144 721 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SP140Q13342 867 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SNX1Q13596 522 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 KIR3DS1Q14943 382 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 PLA1AQ53H76 456 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ARTNQ5T4W7 220 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM72AQ5TYM5 149 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC9A4Q6AI14 798 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM72DQ6L9T8 149 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 C8orf74Q6P047 294 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 DRICH1Q6PGQ1 229 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 TADA2BQ86TJ2 420 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM72BQ86X60 149 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 MIB1Q86YT6 1006 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 RFX6Q8HWS3 928 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 EGFL6Q8IUX8 553 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FRMD1Q8N878 549 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 POMGNT2Q8NAT1 580 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 CCDC26Q8TAB7 109 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 GABPB2Q8TAK5 448 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC35B2Q8TB61 432 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ACTL9Q8TC94 416 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ARNTL2Q8WYA1 636 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ATG4AQ8WYN0 398 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 NKD2Q969F2 451 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 KTI12Q96EK9 354 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZNF764Q96H86 408 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 C1orf74Q96LT6 269 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SERPINB11Q96P15 392 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 CSPG4P5Q96PW8 444 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ALPK1Q96QP1 1244 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 CDK5RAP1Q96SZ6 601 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 PNKPQ96T60 521 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM118BQ9BPY3 351 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZNF670Q9BS34 389 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 PARD6BQ9BYG5 372 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FRMD8P1Q9BZ68 369 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 TINAGL1Q9GZM7 467 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SIK2Q9H0K1 926 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 RMI1Q9H9A7 625 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC28A3Q9HAS3 691 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 IL21RQ9HBE5 538 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZNF334Q9HCZ1 680 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 LIN7CQ9NUP9 197 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 ETNK2Q9NVF9 386 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 PPP1R14DQ9NXH3 145 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 UXTQ9UBK9 157 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 OR12D3Q9UGF7 316 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 EBF1Q9UH73 591 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 AMACRQ9UHK6 382 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 RAB21Q9UL25 225 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 NFU1Q9UMS0 254 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 HBS1LQ9Y450 684 aaKnown RBP5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 SNX10Q9Y5X0 201 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 CDH23Q9H251 3354 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 REV3LO60673 3130 aa5.2□□□□□ -1.58
HMGB1P4-201ENST00000455362 FITM1A5D6W6 292 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 C2orf78A6NCI8 922 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 EPOPA6NHQ4 379 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 APOC4-APOC2K7ER74 178 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 EEF2KO00418 725 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 DCLK1O15075 740 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CCL16O15467 120 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TTI1O43156 1089 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms