RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CFAP99D6REC4 459 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 PGRMC1O00264 195 aaKnown RBP24.36■■□□□ 1.49
MSH2-203ENST00000454849 GOT2P00505 430 aaKnown RBP24.36■■□□□ 1.49
MSH2-203ENST00000454849 ITGA2BP08514 1039 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 THRAP10827 490 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 AMD1P17707 334 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 COILP38432 576 aaPredicted RBP24.36■■□□□ 1.49
MSH2-203ENST00000454849 GFERP55789 205 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 EIF3IQ13347 325 aaKnown RBP24.36■■□□□ 1.49
MSH2-203ENST00000454849 SPACA3Q8IXA5 215 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 INSM2Q96T92 566 aaPredicted RBP24.36■■□□□ 1.49
MSH2-203ENST00000454849 C19orf43Q9BQ61 176 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 SNX12Q9UMY4 172 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 CHD6Q8TD26 2715 aa24.36■■□□□ 1.49
MSH2-203ENST00000454849 ZFYVE26Q68DK2 2539 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 PRAMEF10O60809 474 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 KCNJ13O60928 360 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 UBXN7O94888 489 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 MGAT1P26572 445 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 FOXN2P32314 431 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 ABCG1P45844 678 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 ANKRD22Q5VYY1 191 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 IGF2-ASQ6U949 168 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 CES3Q6UWW8 571 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 C4orf22Q6V702 233 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 LDB1Q86U70 411 aaPredicted RBP24.35■■□□□ 1.49
MSH2-203ENST00000454849 ZNF248Q8NDW4 579 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 PPHLN1Q8NEY8 458 aaKnown RBP24.35■■□□□ 1.49
MSH2-203ENST00000454849 PMEPA1Q969W9 287 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 RANBP9Q96S59 729 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 EIF2B3Q9NR50 452 aaKnown RBP24.35■■□□□ 1.49
MSH2-203ENST00000454849 OCIAD1Q9NX40 245 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 FOXJ2Q9P0K8 574 aa24.35■■□□□ 1.49
MSH2-203ENST00000454849 AKAP7Q9P0M2 348 aaPredicted RBP24.35■■□□□ 1.49
MSH2-203ENST00000454849 IGLV3-16A0A075B6K0 115 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 LILRA5A6NI73 299 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 KLK10O43240 276 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 OR1I1O60431 355 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 AVILO75366 819 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 FGF3P11487 239 aaPredicted RBP24.34■■□□□ 1.49
MSH2-203ENST00000454849 PSMA3P25788 255 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 PRLHRP49683 370 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 EPHA4P54764 986 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 GNG11P61952 73 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 CLPPQ16740 277 aaPredicted RBP24.34■■□□□ 1.49
MSH2-203ENST00000454849 CCDC137Q6PK04 289 aaKnown RBP24.34■■□□□ 1.49
MSH2-203ENST00000454849 WDR74Q6RFH5 385 aaPredicted RBP24.34■■□□□ 1.49
MSH2-203ENST00000454849 NAPRTQ6XQN6 538 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 FAM129CQ86XR2 697 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 AVL9Q8NBF6 648 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 KCNE4Q8WWG9 221 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 RSC1A1Q92681 617 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 RMDN2Q96LZ7 410 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 C12orf66Q96MD2 445 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 TGM7Q96PF1 710 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 CCM2Q9BSQ5 444 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 POT1Q9NUX5 634 aa24.34■■□□□ 1.49
MSH2-203ENST00000454849 ADAMTS20P59510 1910 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 EFCAB7A8K855 629 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 CSTF2P33240 577 aaKnown RBP eCLIP24.33■■□□□ 1.49
MSH2-203ENST00000454849 PREPP48147 710 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 LEPRP48357 1165 aaKnown RBP24.33■■□□□ 1.49
MSH2-203ENST00000454849 SEMA3AQ14563 771 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 GSE1Q14687 1217 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 BRD3Q15059 726 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 ZNF534Q76KX8 674 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 CLEC14AQ86T13 490 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 ZFAND4Q86XD8 727 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 HEXDCQ8WVB3 486 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 RNF31Q96EP0 1072 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 UCK1Q9HA47 277 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 SYBUQ9NX95 663 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 ITPR1Q14643 2758 aa24.33■■□□□ 1.49
MSH2-203ENST00000454849 C9orf172C9J069 976 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 SLC35G4P0C7Q5 338 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 MTHFD1P11586 935 aaKnown RBP24.32■■□□□ 1.48
MSH2-203ENST00000454849 NMBRP28336 390 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 PRAMEP78395 509 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 TLE3Q04726 772 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 TRA2AQ13595 282 aaKnown RBP eCLIP24.32■■□□□ 1.48
MSH2-203ENST00000454849 LAMB3Q13751 1172 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 TGIF1Q15583 401 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 PCID2Q5JVF3 399 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 AFTPHQ6ULP2 937 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 AGBL5Q8NDL9 886 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 OR4L1Q8NH43 312 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 ACTRT1Q8TDG2 376 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 ART4Q93070 314 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 TMEM159Q96B96 161 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 CAPZA3Q96KX2 299 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 LINC00615Q96LM1 132 aaPredicted RBP24.32■■□□□ 1.48
MSH2-203ENST00000454849 NAP1L3Q99457 506 aaPredicted RBP24.32■■□□□ 1.48
MSH2-203ENST00000454849 DPYSL5Q9BPU6 564 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 BFARQ9NZS9 450 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 MARCH4Q9P2E8 410 aaPredicted RBP24.32■■□□□ 1.48
MSH2-203ENST00000454849 PDP2Q9P2J9 529 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 ACSL5Q9ULC5 683 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 ZFHX4Q86UP3 3567 aa24.32■■□□□ 1.48
MSH2-203ENST00000454849 GOLGA8MH3BSY2 632 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 HGSO14964 777 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms