RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 A0A1W2PR77 199 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 NUAK1O60285 661 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CCDC166P0CW27 439 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 ZNF37AP17032 561 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 AOAHP28039 575 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PDHA2P29803 388 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PBLDP30039 288 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 AKT2P31751 481 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 GLRBP48167 497 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PRLHRP49683 370 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 ATP1A2P50993 1020 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 IRX4P78413 519 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CSHL1Q14406 222 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TCEA2Q15560 299 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 ZNF542PQ5EBM4 170 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 BRICD5Q6PL45 260 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CYHR1Q6ZMK1 362 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 FAM83HQ6ZRV2 1179 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TAOK1Q7L7X3 1001 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 LONP2Q86WA8 852 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CADM4Q8NFZ8 388 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TCP10LQ8TDR4 215 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 HEXDCQ8WVB3 486 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 OR1E3Q8WZA6 343 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 KCNJ9Q92806 393 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 NELL1Q92832 810 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TSACCQ96A04 125 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PTERQ96BW5 349 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PDXPQ96GD0 296 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 SMC6Q96SB8 1091 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TTC1Q99614 292 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 C1QTNF7Q9BXJ2 289 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 DUSP15Q9H1R2 295 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CCDC68Q9H2F9 335 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TCEAL2Q9H3H9 227 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 KCNK9Q9NPC2 374 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 LATS2Q9NRM7 1088 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 PHPT1Q9NRX4 125 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TAS2R13Q9NYV9 303 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 KLF15Q9UIH9 416 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 GRID1Q9ULK0 1009 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 CORO1CQ9ULV4 474 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 SLC17A4Q9Y2C5 497 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 ACOT9Q9Y305 439 aa10.8□□□□□ -0.68
SCN9A-205ENST00000454569 ATXN2Q99700 1313 aaKnown RBP10.8□□□□□ -0.68
SCN9A-205ENST00000454569 TMEM120BA0PK00 339 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 E5RI56 91 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 PFDN6O15212 129 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ZBTB14O43829 449 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 VEGFDO43915 354 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 VPS26AO75436 327 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 MPOP05164 745 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 OR56A5P0C7T3 313 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 SP9P0CG40 484 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 NR1D1P20393 614 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 CD9P21926 228 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ITPKAP23677 461 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 CD27P26842 260 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 PPARGP37231 505 aaPredicted RBP10.79□□□□□ -0.68
SCN9A-205ENST00000454569 PREPP48147 710 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 SLC12A2P55011 1212 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 NFATC4Q14934 902 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 BCL7AQ4VC05 210 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ENPP7Q6UWV6 458 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 PIWIL4Q7Z3Z4 852 aaKnown RBP10.79□□□□□ -0.68
SCN9A-205ENST00000454569 TRAPPC5Q8IUR0 188 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ANKRD42Q8N9B4 389 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 APOPT1Q96IL0 206 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 SELENOSQ9BQE4 189 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 MIR1-1HGQ9H1L0 117 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ALG2Q9H553 416 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 GPR27Q9NS67 375 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 TMEM74BQ9NUR3 256 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ZNHIT2Q9UHR6 403 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 SUFUQ9UMX1 484 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ACTL7BQ9Y614 415 aa10.79□□□□□ -0.68
SCN9A-205ENST00000454569 ARID1BQ8NFD5 2236 aaPredicted RBP10.79□□□□□ -0.68
SCN9A-205ENST00000454569 CUL9Q8IWT3 2517 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 KRT87PA6NCN2 255 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 CDC7O00311 574 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 COPEO14579 308 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 GRID2O43424 1007 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 GPC4O75487 556 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 POP7O75817 140 aaKnown RBP10.78□□□□□ -0.68
SCN9A-205ENST00000454569 AP2A2O94973 939 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 PYGLP06737 847 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 THEGLP0DJG4 465 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 CD1DP15813 335 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 CRABP2P29373 138 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 CRHR1P34998 444 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 ETV4P43268 484 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 KIAA1024LP59773 190 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 PPP2R2AP63151 447 aa10.78□□□□□ -0.68
SCN9A-205ENST00000454569 EIF2B5Q13144 721 aaKnown RBP10.78□□□□□ -0.68
SCN9A-205ENST00000454569 BOP1Q14137 746 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms