RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RPE65Q16518 533 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 HIBCHQ6NVY1 386 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 TMEM26Q6ZUK4 368 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 ZNF761Q86XN6 746 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 LILRA3Q8N6C8 439 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 CLDN19Q8N6F1 224 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 OR6P1Q8NGX9 317 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 C16orf45Q96MC5 204 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 TMEM74Q96NL1 305 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 DPYSL5Q9BPU6 564 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 TRIM56Q9BRZ2 755 aaKnown RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 OR52A5Q9H2C5 316 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 EPB41L1Q9H4G0 881 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 VPS37BQ9H9H4 285 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 KCNK4Q9NYG8 393 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 ATXN7L1Q9ULK2 861 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 KNTC1P50748 2209 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 ADAMTS20P59510 1910 aa13.88□□□□□ -0.19
HDAC4-205ENST00000454542 MN1Q10571 1320 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-205ENST00000454542 MAP1BP46821 2468 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 TRBV23OR9-2A0A075B6M9 112 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 SDR42E2A6NKP2 422 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 CD3EAPO15446 510 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 ZW10O43264 779 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 DUX1O43812 170 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 OR1I1O60431 355 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 USP1O94782 785 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 VIPP01282 170 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 THRAP10827 490 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 MTHFD1P11586 935 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 OGNP20774 298 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 RPS3P23396 243 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 HALP42357 657 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 TTPAP49638 278 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 INHBCP55103 352 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 RPA4Q13156 261 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 EIF3IQ13347 325 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 ANKRD20A4Q4UJ75 823 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 CES3Q6UWW8 571 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 ZNF574Q6ZN55 896 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 OR4D9Q8NGE8 314 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 ZNF669Q96BR6 464 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 ATXN7L3BQ96GX2 97 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 PRR11Q96HE9 360 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 FCRL3Q96P31 734 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 KRT12Q99456 494 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 SLC38A3Q99624 504 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 WDR83Q9BRX9 315 aaKnown RBP13.87□□□□□ -0.19
HDAC4-205ENST00000454542 CCM2Q9BSQ5 444 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 P2RY12Q9H244 342 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 SYNDIG1Q9H7V2 258 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 SLC40A1Q9NP59 571 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 OGFRQ9NZT2 677 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 PDP2Q9P2J9 529 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 PCDHGA8Q9Y5G5 932 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 UNC13CQ8NB66 2214 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 USP24Q9UPU5 2620 aa13.87□□□□□ -0.19
HDAC4-205ENST00000454542 CCDC187A0A096LP49 1063 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 PRAMEF33A0A0G2JMD5 474 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 SLC5A10A0PJK1 596 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 MAGEB16A2A368 324 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 TMX2-CTNND1H3BSU7 103 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 PRMT5O14744 637 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 LIN7AO14910 233 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 VAPBO95292 243 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 FTH1P02794 183 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 PAMP19021 973 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 ALDH4A1P30038 563 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 PPARGP37231 505 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 LSSP48449 732 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 ADARP55265 1226 aaKnown RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 C2orf54Q08AI8 447 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 BIRC2Q13490 618 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 KIF26BQ2KJY2 2108 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 OR10G6Q8NH81 332 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 MDM1Q8TC05 714 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 ZCCHC14Q8WYQ9 949 aaKnown RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 LPGAT1Q92604 370 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 SNF8Q96H20 258 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 INSM2Q96T92 566 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-205ENST00000454542 TTC1Q99614 292 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 TBC1D10AQ9BXI6 508 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 FOXP3Q9BZS1 431 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 WWP1Q9H0M0 922 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 POLR1BQ9H9Y6 1135 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 RDH14Q9HBH5 336 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 SAMD15Q9P1V8 674 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 CDC23Q9UJX2 597 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 RPS6KL1Q9Y6S9 549 aa13.86□□□□□ -0.19
HDAC4-205ENST00000454542 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 FAM187AA6NFU0 413 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 RAD51CO43502 376 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 C9P02748 559 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms