RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PPIDQ08752 370 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 XRCC4Q13426 336 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PPP2R5EQ16537 467 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CRTC2Q53ET0 693 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF789Q5FWF6 425 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CT47A1Q5JQC4 288 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FNBP1LQ5T0N5 605 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCDC183Q5T5S1 534 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GPRC6AQ5T6X5 926 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C1orf189Q5VU69 101 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 APLFQ8IW19 511 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RHOT1Q8IXI2 618 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RBMXL3Q8N7X1 1067 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AVL9Q8NBF6 648 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IPMKQ8NFU5 416 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OR1L3Q8NH93 324 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAM71BQ8TC56 605 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 BLOC1S5Q8TDH9 187 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ADAMTS17Q8TE56 1095 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CPLX3Q8WVH0 158 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IMP4Q96G21 291 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZDHHC12Q96GR4 267 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OXNAD1Q96HP4 312 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF830Q96NB3 372 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TSGA13Q96PP4 275 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 APOL2Q9BQE5 337 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HGH1Q9BTY7 390 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ADGRE3Q9BY15 652 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UCK1Q9HA47 277 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRIM39Q9HCM9 518 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PDE7BQ9NP56 450 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IL26Q9NPH9 171 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMEM63CQ9P1W3 806 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CTTNBP2NLQ9P2B4 639 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RPL26L1Q9UNX3 145 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NTNG1Q9Y2I2 539 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SETD2Q9BYW2 2564 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PKDREJQ9NTG1 2253 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZGRF1Q86YA3 2104 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PCM1Q15154 2024 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NUP210LQ5VU65 1888 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UBA6A0AVT1 1052 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GSAPA4D1B5 854 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LRRC10BA6NIK2 292 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC9B1P1A6NJY1 282 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C3orf70A6NLC5 250 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OR5K4A6NMS3 321 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ENO4A6NNW6 628 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMEM150CB9EJG8 249 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MYO1FO00160 1098 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 APOL1O14791 398 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HCRTR1O43613 425 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 POP7O75817 140 aaKnown RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMEM63AO94886 807 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PROSCO94903 275 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PRAMEF1O95521 474 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NDST3O95803 873 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LDLRP01130 860 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GYPCP04921 128 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 POLBP06746 335 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PRSS56P0CW18 603 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PRF1P14222 555 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ST6GAL1P15907 406 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCNCP24863 283 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PTPN3P26045 913 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CD68P34810 354 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HALP42357 657 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MARCKSL1P49006 195 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RPS15P62841 145 aaKnown RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TUBB4BP68371 445 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMEM115Q12893 351 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TUBB2AQ13885 445 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GTF2H3Q13889 308 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MESDQ14696 234 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SIRPB2Q5JXA9 342 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AGAP9Q5VTM2 703 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PPP1R2P3Q6NXS1 205 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ABRAXAS1Q6UWZ7 409 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF517Q6ZMY9 492 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MAMDC2Q7Z304 686 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GLT6D1Q7Z4J2 308 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMC3Q7Z5M5 1100 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MRGPREQ86SM8 312 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SYVN1Q86TM6 617 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LUZP1Q86V48 1076 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NLRP8Q86W28 1048 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AMZ2Q86W34 360 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RFX6Q8HWS3 928 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SRRM1Q8IYB3 904 aaKnown RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SYTL1Q8IYJ3 562 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CISD2Q8N5K1 135 aaKnown RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UBXN4Q92575 508 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 INPP5DQ92835 1189 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF501Q96CX3 271 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CLIP3Q96DZ5 547 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C12orf66Q96MD2 445 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OLFM3Q96PB7 478 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms