RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CFAP206Q8IYR0 622 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 OTUD6BQ8N6M0 293 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 P2RY12Q9H244 342 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 PLAC1Q9HBJ0 212 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 C20orf96Q9NUD7 363 aaPredicted RBP27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 CHMP2BQ9UQN3 213 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 PRMT5O14744 637 aaPredicted RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 ZNF500O60304 480 aaPredicted RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 TOP3BO95985 862 aaKnown RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 XRCC1P18887 633 aaPredicted RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 PDIA2Q13087 525 aaKnown RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 THOC5Q13769 683 aaKnown RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 CLCA4Q14CN2 919 aa27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 ZDHHC24Q6UX98 284 aa27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 CENPUQ71F23 418 aa27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 SLC9B2Q86UD5 537 aa27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 LMNTD2Q8IXW0 634 aa27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 LILRA3Q8N6C8 439 aaPredicted RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 SARS2Q9NP81 518 aaKnown RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 ZNF624Q9P2J8 865 aaPredicted RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 ZC3H7BQ9UGR2 993 aaKnown RBP27.44■■□□□ 1.98
SMARCC1-203ENST00000454240 UNC13CQ8NB66 2214 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 RHPN2P1A8MT19 583 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 F8W8V4 182 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 HYAL3O43820 417 aaPredicted RBP27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 FTH1P02794 183 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 RPS3P23396 243 aaKnown RBP eCLIP27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 PLTPP55058 493 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 UBE2IP63279 158 aaKnown RBP27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 GLE1Q53GS7 698 aaKnown RBP27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 RNF187Q5TA31 235 aaPredicted RBP27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 STEAP4Q687X5 459 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 TMPRSS7Q7RTY8 843 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 LRRC6Q86X45 466 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 UNC5BQ8IZJ1 945 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 FBXO25Q8TCJ0 367 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 CARD6Q9BX69 1037 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 ABCG4Q9H172 646 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 CPNE7Q9UBL6 633 aa27.43■■□□□ 1.98
SMARCC1-203ENST00000454240 PFDN6O15212 129 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 CASC3O15234 703 aaKnown RBP27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 SLC19A1P41440 591 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 GPR3P46089 330 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 HHEXQ03014 270 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 FASTKD3Q14CZ7 662 aaKnown RBP27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 ZNF470Q6ECI4 717 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 UNC5AQ6ZN44 842 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 SPRED1Q7Z699 444 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 KCNMB4Q86W47 210 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 TMPRSS12Q86WS5 348 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 ANKMY2Q8IV38 441 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 AVL9Q8NBF6 648 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 WDR48Q8TAF3 677 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 CALML6Q8TD86 181 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 LPGAT1Q92604 370 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 COG4Q9H9E3 785 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 INTS10Q9NVR2 710 aaKnown RBP27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 FAM8A1Q9UBU6 413 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 DMGDHQ9UI17 866 aaKnown RBP27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 PSMD13Q9UNM6 376 aa27.42■■□□□ 1.98
SMARCC1-203ENST00000454240 ESYT3A0FGR9 886 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 OR52A4PA6NMU1 304 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 NTN3O00634 580 aaPredicted RBP27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 EIF3HO15372 352 aaKnown RBP eCLIP27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 S1PR4O95977 384 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 HALP42357 657 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 ADARP55265 1226 aaKnown RBP27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 GUCY2DQ02846 1103 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 BIRC2Q13490 618 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 HSP90AA5PQ58FG0 334 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 CDCP2Q5VXM1 449 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 DENND6AQ8IWF6 608 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 CACTIN-AS1Q8N1I8 211 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 GALNT15Q8N3T1 639 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 FBXO36Q8NEA4 188 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 BIRC8Q96P09 236 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 WWP1Q9H0M0 922 aa27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 STN1Q9H668 368 aaKnown RBP27.41■■□□□ 1.98
SMARCC1-203ENST00000454240 FAM221BA6H8Z2 402 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 B4GAT1O43505 415 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 CLDN6P56747 220 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 CCL7P80098 99 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 RPA4Q13156 261 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 CTBP1Q13363 440 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 FRG1Q14331 258 aaKnown RBP27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 RPE65Q16518 533 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 HES3Q5TGS1 186 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 CAPRIN2Q6IMN6 1127 aaKnown RBP27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 Q8N9G6 341 aaPredicted RBP27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 SH3KBP1Q96B97 665 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 CERS2Q96G23 380 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 CFAP36Q96G28 342 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 FAM167BQ9BTA0 163 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 PHACTR1Q9C0D0 580 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 LRRN3Q9H3W5 708 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 L2HGDHQ9H9P8 463 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 GNPTGQ9UJJ9 305 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 VPS9D1Q9Y2B5 631 aa27.4■■□□□ 1.98
SMARCC1-203ENST00000454240 A0A1W2PQM1 296 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 UBA6A0AVT1 1052 aaPredicted RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms