RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 Q8N9G6 341 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-202ENST00000452372 SNIP1Q8TAD8 396 aaKnown RBP19.57■□□□□ 0.72
COL9A3-202ENST00000452372 LRRN3Q9H3W5 708 aa19.57■□□□□ 0.72
COL9A3-202ENST00000452372 SCHIP1Q9P0W5 487 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-202ENST00000452372 SAMD15Q9P1V8 674 aa19.57■□□□□ 0.72
COL9A3-202ENST00000452372 C17orf113A0A1B0GUU1 675 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 A0A1W2PQM1 296 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 SMAPO00193 183 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 ZW10O43264 779 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 B4GAT1O43505 415 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 VAPBO95292 243 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 RPLP0P05388 317 aaKnown RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 BRAFP15056 766 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 ARNTP27540 789 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 RPL10P27635 214 aaKnown RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 DRG2P55039 364 aaKnown RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 SPIDRQ14159 915 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 NFE2L1Q14494 772 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 SEMA3AQ14563 771 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 SEPT7Q16181 437 aaKnown RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 AARS2Q5JTZ9 985 aaKnown RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 KIAA0930Q6ICG6 404 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 FAM83HQ6ZRV2 1179 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 MAATS1Q7Z4T9 603 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 TMEM135Q86UB9 458 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 AGGF1Q8N302 714 aaeCLIP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 AVL9Q8NBF6 648 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 FGF11Q92914 225 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 SH3KBP1Q96B97 665 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 DEPDC7Q96QD5 511 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 PRORYQ9H606 182 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 STN1Q9H668 368 aaKnown RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 ZNF624Q9P2J8 865 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-202ENST00000452372 CPNE7Q9UBL6 633 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 ACSL5Q9ULC5 683 aa19.56■□□□□ 0.72
COL9A3-202ENST00000452372 KALRNO60229 2985 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 A0A1W2PNU3 283 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 FAM187AA6NFU0 413 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 EFCAB8A8MWE9 144 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 QSOX1O00391 747 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 URI1O94763 535 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 SEC31AO94979 1220 aaKnown RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 GSTM1P09488 218 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 PAMP19021 973 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 ALDH4A1P30038 563 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 PBLDP30039 288 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 SLC19A1P41440 591 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 ARCN1P48444 511 aaKnown RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 TTPAP49638 278 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 OR1D5P58170 312 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 UBE2IP63279 158 aaKnown RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 GSTM4Q03013 218 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 HHEXQ03014 270 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 C2orf54Q08AI8 447 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 ANKRD20A4Q4UJ75 823 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 HIBCHQ6NVY1 386 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 XKR5Q6UX68 686 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 RBM44Q6ZP01 1051 aaKnown RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 CFAP206Q8IYR0 622 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 ZNF592Q92610 1267 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 SNF8Q96H20 258 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 FCRL3Q96P31 734 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 GFM1Q96RP9 751 aaKnown RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 CCM2Q9BSQ5 444 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 VPS37BQ9H9H4 285 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 MARCH4Q9P2E8 410 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-202ENST00000452372 WDR37Q9Y2I8 494 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 PRSS21Q9Y6M0 314 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 RPS6KL1Q9Y6S9 549 aa19.55■□□□□ 0.72
COL9A3-202ENST00000452372 OR1I1O60431 355 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 HALP42357 657 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 ABCG1P45844 678 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 MRPS25P82663 173 aaKnown RBP19.54■□□□□ 0.72
COL9A3-202ENST00000452372 CKAP4Q07065 602 aaKnown RBP19.54■□□□□ 0.72
COL9A3-202ENST00000452372 CLCA4Q14CN2 919 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 TBC1D25Q3MII6 688 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 LDB1Q86U70 411 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-202ENST00000452372 HM13Q8TCT9 377 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 SLC38A3Q99624 504 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 TRIM56Q9BRZ2 755 aaKnown RBP19.54■□□□□ 0.72
COL9A3-202ENST00000452372 ERP44Q9BS26 406 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-202ENST00000452372 TRIM31Q9BZY9 425 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 MAD1L1Q9Y6D9 718 aa19.54■□□□□ 0.72
COL9A3-202ENST00000452372 TP73O15350 636 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 RAD51CO43502 376 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 CSO75390 466 aaKnown RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 USP1O94782 785 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 VIPP01282 170 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 OR56A5P0C7T3 313 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 RPL21P46778 160 aaKnown RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 ITGA8P53708 1063 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 DHX9Q08211 1270 aaKnown RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 SQSTM1Q13501 440 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 CLPPQ16740 277 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 WHAMMP3Q1A5X7 153 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 ISXQ2M1V0 245 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 ZNF658BQ4V348 819 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 MRNIPQ6NTE8 343 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 SDCCAG8Q86SQ7 713 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms