RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FBXO39Q8N4B4 442 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 DTWD2Q8NBA8 298 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 DNAJC9Q8WXX5 260 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 VOPP1Q96AW1 172 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 C19orf60Q96EN9 201 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 NAF1Q96HR8 494 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 C3orf30Q96M34 536 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 C19orf43Q9BQ61 176 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 C1QTNF3Q9BXJ4 246 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 SLC2A11Q9BYW1 496 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 YY1AP1Q9H869 796 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 GEMIN8Q9NWZ8 242 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 SLC27A6Q9Y2P4 619 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 CXorf51AA0A1B0GTR3 108 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 SYCE1LA8MT33 242 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 STX16O14662 325 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 UBDO15205 165 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 ACADSP16219 412 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 EEF1DP29692 281 aaKnown RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 GKP32189 559 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 ATP4BP51164 291 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 CLCN7P51798 805 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 BCL2L1Q07817 233 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 FBXO43Q4G163 708 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 PIGGQ5H8A4 983 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 TMEM215Q68D42 235 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 BNC2Q6ZN30 1099 aaPredicted RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 TAS2R42Q7RTR8 314 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 SYNPOQ8N3V7 929 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 RPLP0P6Q8NHW5 317 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 LINGO1Q96FE5 620 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 EFCAB1Q9HAE3 211 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 MID1IP1Q9NPA3 183 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 SPATA6Q9NWH7 488 aaPredicted RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 NDE1Q9NXR1 346 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 DNAJC15Q9Y5T4 150 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 SLC30A1Q9Y6M5 507 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 BTN3A1O00481 513 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 AZIN1O14977 448 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 IGSF6O95976 241 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 TIE1P35590 1138 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 DPP6P42658 865 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 TNFRSF4P43489 277 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 KIR2DL1P43626 348 aaPredicted RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 FOXA1P55317 472 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 IL2P60568 153 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 CLCQ05315 142 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 LCP2Q13094 533 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 FASTKQ14296 549 aaKnown RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 ZNF423Q2M1K9 1284 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 MUM1Q2TAK8 710 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 CERS6Q6ZMG9 384 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 EGFL6Q8IUX8 553 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 CPNE9Q8IYJ1 553 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 TRPC4APQ8TEL6 797 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 ZNF483Q8TF39 744 aaPredicted RBP10.57□□□□□ -0.72
PKP4-206ENST00000452162 EEF1AKMT1Q8WVE0 214 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 NPAS2Q99743 824 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 TNKS2Q9H2K2 1166 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 WDR41Q9HAD4 459 aa10.57□□□□□ -0.72
PKP4-206ENST00000452162 CAPN8A6NHC0 703 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 PSMD12O00232 456 aaPredicted RBP10.56□□□□□ -0.72
PKP4-206ENST00000452162 PRMT5O14744 637 aaPredicted RBP10.56□□□□□ -0.72
PKP4-206ENST00000452162 RPS3P23396 243 aaKnown RBP eCLIP10.56□□□□□ -0.72
PKP4-206ENST00000452162 CA5AP35218 305 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 HNF1BP35680 557 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 HK3P52790 923 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 THOP1P52888 689 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 NAA20P61599 178 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 MAPRE2Q15555 327 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 PITRM1Q5JRX3 1037 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 ANKS6Q68DC2 871 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 FAM151BQ6UXP7 276 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 ZSWIM9Q86XI8 627 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 PHYKPLQ8IUZ5 450 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 C1orf210Q8IVY1 113 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 KBTBD2Q8IY47 623 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 TWIST2Q8WVJ9 160 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 SORCS1Q8WY21 1168 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 N4BP2L2Q92802 583 aaPredicted RBP10.56□□□□□ -0.72
PKP4-206ENST00000452162 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.56□□□□□ -0.721e-7■■■■■ 35.3
PKP4-206ENST00000452162 CCDC97Q96F63 343 aaPredicted RBP10.56□□□□□ -0.72
PKP4-206ENST00000452162 CDRT15Q96T59 188 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 SERPINI1Q99574 410 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 TTC1Q99614 292 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 ATP13A3Q9H7F0 1226 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 ZFYVE1Q9HBF4 777 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 UTP6Q9NYH9 597 aaKnown RBP10.56□□□□□ -0.72
PKP4-206ENST00000452162 TMCO1Q9UM00 188 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 DHRS7Q9Y394 339 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 PCDHB1Q9Y5F3 818 aa10.56□□□□□ -0.72
PKP4-206ENST00000452162 TRBV5-4A0A0C4DH59 114 aa10.55□□□□□ -0.72
PKP4-206ENST00000452162 C1orf232A0A0U1RR37 186 aa10.55□□□□□ -0.72
PKP4-206ENST00000452162 A0A1B0GTL3 188 aa10.55□□□□□ -0.72
PKP4-206ENST00000452162 IQCF5A8MTL0 148 aa10.55□□□□□ -0.72
PKP4-206ENST00000452162 PIP5K1BO14986 540 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms