RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SLC12A9Q9BXP2 914 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 RAB33BQ9H082 229 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 ZNF768Q9H5H4 540 aaKnown RBP12.22□□□□□ -0.45
CPSF4-208ENST00000452047 ASB8Q9H765 288 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 EPHA6Q9UF33 1036 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 FEZ2Q9UHY8 353 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-208ENST00000452047 PSMD13Q9UNM6 376 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 SPENQ96T58 3664 aaKnown RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 GOLGA6L9A6NEM1 432 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 MGAT4DA6NG13 374 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 POLR1CO15160 346 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 KIF1CO43896 1103 aaKnown RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 STK17BO94768 372 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 DLGAP3O95886 979 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 MTHFD1P11586 935 aaKnown RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 PLA2G2AP14555 144 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 PBLDP30039 288 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 PPP1CAP62136 330 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 PARP6Q2NL67 630 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 ARHGEF18Q6ZSZ5 1173 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 NLGN4XQ8N0W4 816 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 NXPE1Q8N323 547 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 SPC24Q8NBT2 197 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 NLGN4YQ8NFZ3 816 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 OR2L2Q8NH16 312 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 KLHL6Q8WZ60 621 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 LINC00615Q96LM1 132 aaPredicted RBP12.21□□□□□ -0.45
CPSF4-208ENST00000452047 TMEM121Q9BTD3 319 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 PIKFYVEQ9Y2I7 2098 aa12.21□□□□□ -0.45
CPSF4-208ENST00000452047 SPTA1P02549 2419 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 IGLV3-16A0A075B6K0 115 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 TRBV5-4A0A0C4DH59 114 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 KLHL33A6NCF5 533 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 H7C0S8 307 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 CCL22O00626 93 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 RASSF9O75901 435 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 ITGALP20701 1170 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 MAP4P27816 1152 aaKnown RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 HADHAP40939 763 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 PRLHRP49683 370 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 SEPHS1P49903 392 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 SH3BP2P78314 561 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 TMPRSS15P98073 1019 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 TBR1Q16650 682 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 P3H1Q32P28 736 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 ZNF605Q86T29 641 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 ULK4Q96C45 1275 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 ZDHHC12Q96GR4 267 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 DNAJC1Q96KC8 554 aaKnown RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 INSM2Q96T92 566 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 WWP1Q9H0M0 922 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 LRRC40Q9H9A6 602 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 IMP3Q9NV31 184 aaKnown RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 CRLS1Q9UJA2 301 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 ACSL5Q9ULC5 683 aa12.2□□□□□ -0.46
CPSF4-208ENST00000452047 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
CPSF4-208ENST00000452047 ASH1LQ9NR48 2969 aaKnown RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 LOC101059948A0A1B0GTJ6 334 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 B8ZZF3 427 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 ZIC2O95409 532 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 AP2A1O95782 977 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 FAM87AP0C7U9 286 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 ZNF28P17035 718 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 NELFEP18615 380 aaKnown RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 MC4RP32245 332 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 STAT5AP42229 794 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 FOXM1Q08050 763 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 ABHD18Q0P651 414 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 MAP7Q14244 749 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 IL11RAQ14626 422 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 OASLQ15646 514 aaKnown RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 GPR33Q49SQ1 333 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 ZNF658BQ4V348 819 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 CACHD1Q5VU97 1274 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 IRGCQ6NXR0 463 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 DUS1LQ6P1R4 473 aaKnown RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 LILRA3Q8N6C8 439 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 HM13Q8TCT9 377 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 LRRC45Q96CN5 670 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 SLC45A3Q96JT2 553 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 C12orf66Q96MD2 445 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 OR6C1Q96RD1 312 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 COPS8Q99627 209 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 FAM96AQ9H5X1 160 aa12.19□□□□□ -0.46
CPSF4-208ENST00000452047 NLE1Q9NVX2 485 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-208ENST00000452047 IGHV5-51A0A0C4DH38 117 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 OR5K3A6NET4 321 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 SLC35G4P0C7Q5 338 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 RALBP11234 206 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms