RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 GBA3Q9H227 469 aa26.54■■□□□ 1.84
USP42-204ENST00000451154 APOC4-APOC2K7ER74 178 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 ANXA9O76027 345 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 APOC2P02655 101 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 FOLR1P15328 257 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 LPOP22079 712 aaPredicted RBP26.53■■□□□ 1.84
USP42-204ENST00000451154 ERV3-1Q14264 604 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 KCNAB1Q14722 419 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 LONRF2Q1L5Z9 754 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 LARP7Q4G0J3 582 aaKnown RBP eCLIP26.53■■□□□ 1.84
USP42-204ENST00000451154 CRTC2Q53ET0 693 aaPredicted RBP26.53■■□□□ 1.84
USP42-204ENST00000451154 CCDC170Q8IYT3 715 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 INSM2Q96T92 566 aaPredicted RBP26.53■■□□□ 1.84
USP42-204ENST00000451154 WWP1Q9H0M0 922 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 IMP3Q9NV31 184 aaKnown RBP26.53■■□□□ 1.84
USP42-204ENST00000451154 PCDHB3Q9Y5E6 796 aa26.53■■□□□ 1.84
USP42-204ENST00000451154 ARHGAP6O43182 974 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 TIAF1O95411 115 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 PRAMEF1O95521 474 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 FURINP09958 794 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 CCNYL3P0C7X3 344 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 MTHFD1P11586 935 aaKnown RBP26.52■■□□□ 1.84
USP42-204ENST00000451154 PLCL1Q15111 1095 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 RANBP10Q6VN20 620 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 SIDT2Q8NBJ9 832 aaKnown RBP26.52■■□□□ 1.84
USP42-204ENST00000451154 ACTL9Q8TC94 416 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 SLC41A2Q96JW4 573 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 MAP3K3Q99759 626 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 FAM118BQ9BPY3 351 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 SMOXQ9NWM0 555 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 SEMA5BQ9P283 1151 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 FKBPLQ9UIM3 349 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 PADI1Q9ULC6 663 aa26.52■■□□□ 1.84
USP42-204ENST00000451154 MGAT4DA6NG13 374 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 C2orf81A6NN90 581 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 ADRA1AP35348 466 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 OTUD4Q01804 1114 aaKnown RBP26.51■■□□□ 1.83
USP42-204ENST00000451154 TAF1AQ15573 450 aaPredicted RBP26.51■■□□□ 1.83
USP42-204ENST00000451154 ITPRIPL1Q6GPH6 555 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 KLHL35Q6PF15 583 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 SARM1Q6SZW1 724 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 CERS6Q6ZMG9 384 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 UBXN4Q92575 508 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 ZNF514Q96K75 400 aaPredicted RBP26.51■■□□□ 1.83
USP42-204ENST00000451154 EPN3Q9H201 632 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 ASB8Q9H765 288 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 PDE7BQ9NP56 450 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 FAM8A1Q9UBU6 413 aa26.51■■□□□ 1.83
USP42-204ENST00000451154 RCCD1A6NED2 376 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 GOLGA6L3A6NEY3 463 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 SRP72O76094 671 aaKnown RBP26.5■■□□□ 1.83
USP42-204ENST00000451154 PSMB4P28070 264 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 COPS2P61201 443 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 TUBB3Q13509 450 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 ANKRD20A2Q5SQ80 823 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 ANKRD20A1Q5TYW2 823 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 ANKRD20A3Q5VUR7 823 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 PWWP2BQ6NUJ5 590 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 DUS1LQ6P1R4 473 aaKnown RBP26.5■■□□□ 1.83
USP42-204ENST00000451154 SPDYE1Q8NFV5 336 aaPredicted RBP26.5■■□□□ 1.83
USP42-204ENST00000451154 C12orf66Q96MD2 445 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 HRASLS2Q9NWW9 162 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 RARRES3Q9UL19 164 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 PCDHA3Q9Y5H8 950 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 KCNMB2Q9Y691 235 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 DUSP10Q9Y6W6 482 aa26.5■■□□□ 1.83
USP42-204ENST00000451154 MACROD2A1Z1Q3 448 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 C5orf60A6NFR6 353 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 EBLN1P0CF75 366 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 CYLC1P35663 651 aaPredicted RBP26.49■■□□□ 1.83
USP42-204ENST00000451154 EIF3EP60228 445 aaKnown RBP26.49■■□□□ 1.83
USP42-204ENST00000451154 TMEM135Q86UB9 458 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 OR2L2Q8NH16 312 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 OSBPL8Q9BZF1 889 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 AKIRIN1Q9H9L7 192 aaPredicted RBP26.49■■□□□ 1.83
USP42-204ENST00000451154 LHX9Q9NQ69 397 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 KCND3Q9UK17 655 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 ACSL5Q9ULC5 683 aa26.49■■□□□ 1.83
USP42-204ENST00000451154 AAR2Q9Y312 384 aaKnown RBP26.49■■□□□ 1.83
USP42-204ENST00000451154 SPTBP11277 2137 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 UBA6A0AVT1 1052 aaPredicted RBP26.48■■□□□ 1.83
USP42-204ENST00000451154 PIPSLA2A3N6 862 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 OR5K3A6NET4 321 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 CYSRT1A8MQ03 144 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 NTRK1P04629 796 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 POLBP06746 335 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 CTNNA1P35221 906 aaKnown RBP26.48■■□□□ 1.83
USP42-204ENST00000451154 ARL4DP49703 201 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 TMPRSS15P98073 1019 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 XIAPP98170 497 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 MSLNQ13421 630 aaPredicted RBP26.48■■□□□ 1.83
USP42-204ENST00000451154 SEPT6Q14141 434 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 COLEC12Q5KU26 742 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 DNTTIP2Q5QJE6 756 aaKnown RBP26.48■■□□□ 1.83
USP42-204ENST00000451154 CYB5D1Q6P9G0 228 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 DARS2Q6PI48 645 aaKnown RBP26.48■■□□□ 1.83
USP42-204ENST00000451154 OR13C4Q8NGS5 318 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 CT55Q8WUE5 264 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 FERMT1Q9BQL6 677 aa26.48■■□□□ 1.83
USP42-204ENST00000451154 FAM96AQ9H5X1 160 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms