RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ARHGAP6O43182 974 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 WT1P19544 449 aaPredicted RBP18.99■□□□□ 0.63
USP40-207ENST00000450940 ATP1A2P50993 1020 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 C19orf57Q0VDD7 668 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 CEACAM20Q6UY09 585 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 ZNF662Q6ZS27 426 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 PRSS42Q7Z5A4 293 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 BEND7Q8N7W2 519 aaPredicted RBP18.99■□□□□ 0.63
USP40-207ENST00000450940 ZFPM2Q8WW38 1151 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 RSC1A1Q92681 617 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 ZNF768Q9H5H4 540 aaKnown RBP18.99■□□□□ 0.63
USP40-207ENST00000450940 NLE1Q9NVX2 485 aaPredicted RBP18.99■□□□□ 0.63
USP40-207ENST00000450940 SEMA5BQ9P283 1151 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 KLHL3Q9UH77 587 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 GUCA1BQ9UMX6 200 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 PCDHGA4Q9Y5G9 962 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 LIASO43766 372 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 ITGB2P05107 769 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 ITGALP20701 1170 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 LEPRP48357 1165 aaKnown RBP18.98■□□□□ 0.63
USP40-207ENST00000450940 MEI1Q5TIA1 1274 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 DET1Q7L5Y6 550 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 SLC13A5Q86YT5 568 aaPredicted RBP18.98■□□□□ 0.63
USP40-207ENST00000450940 ZNF843Q8N446 348 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 GPR150Q8NGU9 434 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 ATG4AQ8WYN0 398 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 KLHL6Q8WZ60 621 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 DNAJC1Q96KC8 554 aaKnown RBP18.98■□□□□ 0.63
USP40-207ENST00000450940 TGM7Q96PF1 710 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 COPS8Q99627 209 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 CRLS1Q9UJA2 301 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 PSMD13Q9UNM6 376 aa18.98■□□□□ 0.63
USP40-207ENST00000450940 TMEM184BQ9Y519 407 aaPredicted RBP18.98■□□□□ 0.63
USP40-207ENST00000450940 GCN1Q92616 2671 aaKnown RBP18.98■□□□□ 0.63
USP40-207ENST00000450940 C17orf113A0A1B0GUU1 675 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 MROH6A6NGR9 719 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 ERI2A8K979 691 aaKnown RBP18.97■□□□□ 0.63
USP40-207ENST00000450940 RALBP11234 206 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 MTHFD1P11586 935 aaKnown RBP18.97■□□□□ 0.63
USP40-207ENST00000450940 TPH1P17752 444 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 PRLHRP49683 370 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 TMPRSS15P98073 1019 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 SEL1L2Q5TEA6 688 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 CAPRIN2Q6IMN6 1127 aaKnown RBP18.97■□□□□ 0.63
USP40-207ENST00000450940 LINC00523Q86TU6 105 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 CACNA2D3Q8IZS8 1091 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 DCUN1D1Q96GG9 259 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 ZDHHC12Q96GR4 267 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 CDKN2AIPNLQ96HQ2 116 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 INSM2Q96T92 566 aaPredicted RBP18.97■□□□□ 0.63
USP40-207ENST00000450940 CTRCQ99895 268 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 APMAPQ9HDC9 416 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 WDR70Q9NW82 654 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 ZDHHC3Q9NYG2 299 aa18.97■□□□□ 0.63
USP40-207ENST00000450940 CFAP99D6REC4 459 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 CCL22O00626 93 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 POLR1CO15160 346 aaPredicted RBP18.96■□□□□ 0.63
USP40-207ENST00000450940 RAD1O60671 282 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 ATP1B2P14415 290 aaPredicted RBP18.96■□□□□ 0.63
USP40-207ENST00000450940 PBLDP30039 288 aaPredicted RBP18.96■□□□□ 0.63
USP40-207ENST00000450940 MC4RP32245 332 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 LINC00303Q3SY05 128 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 ZNF658BQ4V348 819 aaPredicted RBP18.96■□□□□ 0.63
USP40-207ENST00000450940 KLHL35Q6PF15 583 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 TIPARPQ7Z3E1 657 aaKnown RBP18.96■□□□□ 0.63
USP40-207ENST00000450940 ZSCAN1Q8NBB4 408 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 STYXQ8WUJ0 223 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 NAT14Q8WUY8 206 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 JPH3Q8WXH2 748 aaPredicted RBP18.96■□□□□ 0.63
USP40-207ENST00000450940 CCM2Q9BSQ5 444 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 SLC12A9Q9BXP2 914 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 WWP1Q9H0M0 922 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 FAM96AQ9H5X1 160 aa18.96■□□□□ 0.63
USP40-207ENST00000450940 KIF1CO43896 1103 aaKnown RBP18.95■□□□□ 0.62
USP40-207ENST00000450940 SUN1O94901 812 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 DLGAP3O95886 979 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 ACRV1P26436 265 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 MAP4P27816 1152 aaKnown RBP18.95■□□□□ 0.62
USP40-207ENST00000450940 CDKN1CP49918 316 aaPredicted RBP18.95■□□□□ 0.62
USP40-207ENST00000450940 LY6DQ14210 128 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 IL11RAQ14626 422 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 POU6F1Q14863 301 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 RPS6KA1Q15418 735 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 NLGN4XQ8N0W4 816 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 IL22RA1Q8N6P7 574 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 NLGN4YQ8NFZ3 816 aaPredicted RBP18.95■□□□□ 0.62
USP40-207ENST00000450940 HM13Q8TCT9 377 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 MED8Q96G25 268 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 SEMA4CQ9C0C4 833 aa18.95■□□□□ 0.62
USP40-207ENST00000450940 TRIT1Q9H3H1 467 aaKnown RBP18.95■□□□□ 0.62
USP40-207ENST00000450940 HELZ2Q9BYK8 2649 aaKnown RBP18.95■□□□□ 0.62
USP40-207ENST00000450940 STK17BO94768 372 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 LIFP15018 202 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 NELFEP18615 380 aaKnown RBP18.94■□□□□ 0.62
USP40-207ENST00000450940 FDFT1P37268 417 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 CACNG1Q06432 222 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 MAP7Q14244 749 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 SIX1Q15475 284 aaPredicted RBP18.94■□□□□ 0.62
USP40-207ENST00000450940 CACHD1Q5VU97 1274 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 SERPINA9Q86WD7 417 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms