RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 SCHIP1Q9P0W5 487 aaPredicted RBP18.42■□□□□ 0.54
COPS7B-215ENST00000450501 MARCH4Q9P2E8 410 aaPredicted RBP18.42■□□□□ 0.54
COPS7B-215ENST00000450501 FAM8A1Q9UBU6 413 aa18.42■□□□□ 0.54
COPS7B-215ENST00000450501 UTP11Q9Y3A2 253 aaKnown RBP18.42■□□□□ 0.54
COPS7B-215ENST00000450501 PRSS21Q9Y6M0 314 aa18.42■□□□□ 0.54
COPS7B-215ENST00000450501 NDUFS3O75489 264 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 TTC4O95801 387 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 VIPP01282 170 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 PGAM1P18669 254 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 SLC19A1P41440 591 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 ARCN1P48444 511 aaKnown RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 ARL4CP56559 192 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 UBE2IP63279 158 aaKnown RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 TARDBPQ13148 414 aaKnown RBP eCLIP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 HIF1AQ16665 826 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 BBS9Q3SYG4 887 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 ZNF449Q6P9G9 518 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 LDB1Q86U70 411 aaPredicted RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 CFAP206Q8IYR0 622 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 MNS1Q8NEH6 495 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 GPR150Q8NGU9 434 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 CXorf40BQ96DE9 158 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 FCRL3Q96P31 734 aaPredicted RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 TCF12Q99081 682 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 SLC38A3Q99624 504 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 EBNA1BP2Q99848 306 aaKnown RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 TRIM56Q9BRZ2 755 aaKnown RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 RAB17Q9H0T7 212 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 KCNK4Q9NYG8 393 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 WHRNQ9P202 907 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 ZNF624Q9P2J8 865 aaPredicted RBP18.41■□□□□ 0.54
COPS7B-215ENST00000450501 WDR37Q9Y2I8 494 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 MRFAP1Q9Y605 127 aa18.41■□□□□ 0.54
COPS7B-215ENST00000450501 ZCWPW2A0A1B0GU75 182 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 A0A1W2PQM1 296 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 GOLGA8KD6RF30 607 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 GOLGA8TH3BQL2 631 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 PRMT5O14744 637 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-215ENST00000450501 B4GAT1O43505 415 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 SLC35G4P0C7Q5 338 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 OGNP20774 298 aaKnown RBP18.4■□□□□ 0.54
COPS7B-215ENST00000450501 OR1D5P58170 312 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 THOC5Q13769 683 aaKnown RBP18.4■□□□□ 0.54
COPS7B-215ENST00000450501 CLCA4Q14CN2 919 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 LONRF1Q17RB8 773 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 MSS51Q4VC12 460 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 RNF187Q5TA31 235 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-215ENST00000450501 NEPROQ6NW34 567 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 LRRC6Q86X45 466 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 RBM12BQ8IXT5 1001 aaKnown RBP18.4■□□□□ 0.54
COPS7B-215ENST00000450501 GRAMD1AQ96CP6 724 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 LRRC39Q96DD0 335 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 TSSK1BQ9BXA7 367 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 DPH5Q9H2P9 285 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 COG4Q9H9E3 785 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 UCK1Q9HA47 277 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 POT1Q9NUX5 634 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 PSMD13Q9UNM6 376 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 FAM169AQ9Y6X4 670 aa18.4■□□□□ 0.54
COPS7B-215ENST00000450501 COL27A1Q8IZC6 1860 aaPredicted RBP18.39■□□□□ 0.54
COPS7B-215ENST00000450501 AKAP13Q12802 2813 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 IGHV1OR21-1A0A087WYE8 117 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 OR52A4PA6NMU1 304 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 D6RAR5 112 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 LIN7AO14910 233 aaPredicted RBP18.39■□□□□ 0.53
COPS7B-215ENST00000450501 TP73O15350 636 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 CSO75390 466 aaKnown RBP18.39■□□□□ 0.53
COPS7B-215ENST00000450501 BANF1O75531 89 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 EPHA4P54764 986 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 GPLD1P80108 840 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 RPA4Q13156 261 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 RPE65Q16518 533 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 CLPPQ16740 277 aaPredicted RBP18.39■□□□□ 0.53
COPS7B-215ENST00000450501 TYSND1Q2T9J0 566 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 AMZ1Q400G9 498 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 DUPD1Q68J44 220 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 C8orf74Q6P047 294 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 MARCH9Q86YJ5 346 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 LMNTD2Q8IXW0 634 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.39■□□□□ 0.53
COPS7B-215ENST00000450501 OR10G6Q8NH81 332 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 CALML6Q8TD86 181 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 WWP1Q9H0M0 922 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 VPS9D1Q9Y2B5 631 aa18.39■□□□□ 0.53
COPS7B-215ENST00000450501 LILRA5A6NI73 299 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 TMX2-CTNND1H3BSU7 103 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 CASC3O15234 703 aaKnown RBP18.38■□□□□ 0.53
COPS7B-215ENST00000450501 CPNE6O95741 557 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 RPS3P23396 243 aaKnown RBP eCLIP18.38■□□□□ 0.53
COPS7B-215ENST00000450501 PLOD1Q02809 727 aaPredicted RBP18.38■□□□□ 0.53
COPS7B-215ENST00000450501 CRYMQ14894 314 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 ISXQ2M1V0 245 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 MAP9Q49MG5 647 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 ZNF658BQ4V348 819 aaPredicted RBP18.38■□□□□ 0.53
COPS7B-215ENST00000450501 SPANXN3Q5MJ09 141 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 ZNF470Q6ECI4 717 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 PTRHD1Q6GMV3 140 aaKnown RBP18.38■□□□□ 0.53
COPS7B-215ENST00000450501 XKR5Q6UX68 686 aa18.38■□□□□ 0.53
COPS7B-215ENST00000450501 TMEM26Q6ZUK4 368 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms