RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 UTP6Q9NYH9 597 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 TSR3Q9UJK0 312 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 SORCS3Q9UPU3 1222 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 A0A1W2PP55 124 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 LRRC14BA6NHZ5 514 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 FFAR2O15552 330 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 RNASEH2AO75792 299 aaKnown RBP14.02□□□□□ -0.17
USP39-207ENST00000450066 UNC5CO95185 931 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 HOXB2P14652 356 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 PRLHRP49683 370 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 CDH13P55290 713 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 HSPA14Q0VDF9 509 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
USP39-207ENST00000450066 SLC9B1Q4ZJI4 515 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 PDPRQ8NCN5 879 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 ASZ1Q8WWH4 475 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 FAM131CQ96AQ9 280 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 MSANTD3Q96H12 275 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 LRCH3Q96II8 777 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 RDH14Q9HBH5 336 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 SERGEFQ9UGK8 458 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 ADAMTS6Q9UKP5 1117 aa14.02□□□□□ -0.17
USP39-207ENST00000450066 OR2AG2A6NM03 316 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TRPC5OSA6NMA1 111 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TMEM233B4DJY2 109 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 ATG13O75143 517 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TM7SF2O76062 418 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 FSBPO95073 299 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 S100BP04271 92 aaPredicted RBP14.01□□□□□ -0.17
USP39-207ENST00000450066 CLCQ05315 142 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 LCP2Q13094 533 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 KRT72Q14CN4 511 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 AGERQ15109 404 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
USP39-207ENST00000450066 METTL21CQ5VZV1 264 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 NEK10Q6ZWH5 1172 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 ZNF483Q8TF39 744 aaPredicted RBP14.01□□□□□ -0.17
USP39-207ENST00000450066 ELMO1Q92556 727 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TUBB6Q9BUF5 446 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 NUF2Q9BZD4 464 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 CD248Q9HCU0 757 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TNFRSF12AQ9NP84 129 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 PCTPQ9UKL6 214 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TRAF6Q9Y4K3 522 aa14.01□□□□□ -0.17
USP39-207ENST00000450066 TNPO3Q9Y5L0 923 aaKnown RBP14.01□□□□□ -0.17
USP39-207ENST00000450066 IGLON5A6NGN9 336 aa14□□□□□ -0.17
USP39-207ENST00000450066 GPC4O75487 556 aa14□□□□□ -0.17
USP39-207ENST00000450066 CDK14O94921 469 aa14□□□□□ -0.17
USP39-207ENST00000450066 PCDH8O95206 1070 aa14□□□□□ -0.17
USP39-207ENST00000450066 DNTTP04053 509 aa14□□□□□ -0.17
USP39-207ENST00000450066 ASGR2P07307 311 aa14□□□□□ -0.17
USP39-207ENST00000450066 FGF4P08620 206 aa14□□□□□ -0.17
USP39-207ENST00000450066 MPC1LP0DKB6 136 aa14□□□□□ -0.17
USP39-207ENST00000450066 T-ENOLP0DO92 83 aa14□□□□□ -0.17
USP39-207ENST00000450066 VCLP18206 1134 aa14□□□□□ -0.17
USP39-207ENST00000450066 TSPAN8P19075 237 aa14□□□□□ -0.17
USP39-207ENST00000450066 AGTR2P50052 363 aa14□□□□□ -0.17
USP39-207ENST00000450066 CTSCP53634 463 aa14□□□□□ -0.17
USP39-207ENST00000450066 SH3BP2P78314 561 aa14□□□□□ -0.17
USP39-207ENST00000450066 BOP1Q14137 746 aaKnown RBP14□□□□□ -0.17
USP39-207ENST00000450066 ADAMTSL4Q6UY14 1074 aa14□□□□□ -0.17
USP39-207ENST00000450066 TMPRSS6Q8IU80 811 aa14□□□□□ -0.17
USP39-207ENST00000450066 BEND7Q8N7W2 519 aaPredicted RBP14□□□□□ -0.17
USP39-207ENST00000450066 DLG3Q92796 817 aa14□□□□□ -0.17
USP39-207ENST00000450066 PRR11Q96HE9 360 aaPredicted RBP14□□□□□ -0.17
USP39-207ENST00000450066 NSUN5Q96P11 429 aaKnown RBP14□□□□□ -0.17
USP39-207ENST00000450066 CCM2Q9BSQ5 444 aa14□□□□□ -0.17
USP39-207ENST00000450066 TRIM39Q9HCM9 518 aa14□□□□□ -0.17
USP39-207ENST00000450066 TCF7L2Q9NQB0 619 aa14□□□□□ -0.17
USP39-207ENST00000450066 FBXL12Q9NXK8 326 aa14□□□□□ -0.17
USP39-207ENST00000450066 SCML1Q9UN30 329 aa14□□□□□ -0.17
USP39-207ENST00000450066 CDYLQ9Y232 598 aa14□□□□□ -0.17
USP39-207ENST00000450066 CAPN14A8MX76 684 aa14□□□□□ -0.17
USP39-207ENST00000450066 SLCO2B1O94956 709 aa14□□□□□ -0.17
USP39-207ENST00000450066 MLYCDO95822 493 aa14□□□□□ -0.17
USP39-207ENST00000450066 C8GP07360 202 aa14□□□□□ -0.17
USP39-207ENST00000450066 ENO2P09104 434 aaPredicted RBP14□□□□□ -0.17
USP39-207ENST00000450066 C7P10643 843 aa14□□□□□ -0.17
USP39-207ENST00000450066 COL9A1P20849 921 aa14□□□□□ -0.17
USP39-207ENST00000450066 NCALDP61601 193 aa14□□□□□ -0.17
USP39-207ENST00000450066 PCBP2Q15366 365 aaKnown RBP eCLIP14□□□□□ -0.17
USP39-207ENST00000450066 TBCCQ15814 346 aa14□□□□□ -0.17
USP39-207ENST00000450066 PHKG1Q16816 387 aa14□□□□□ -0.17
USP39-207ENST00000450066 FBXO43Q4G163 708 aa14□□□□□ -0.17
USP39-207ENST00000450066 BCL7AQ4VC05 210 aa14□□□□□ -0.17
USP39-207ENST00000450066 CDKL4Q5MAI5 379 aa14□□□□□ -0.17
USP39-207ENST00000450066 IER5LQ5T953 404 aa14□□□□□ -0.17
USP39-207ENST00000450066 TMEM220Q6QAJ8 160 aa14□□□□□ -0.17
USP39-207ENST00000450066 ADGRG6Q86SQ4 1221 aa14□□□□□ -0.17
USP39-207ENST00000450066 CLYBLQ8N0X4 340 aa14□□□□□ -0.17
USP39-207ENST00000450066 TRPC4APQ8TEL6 797 aa14□□□□□ -0.17
USP39-207ENST00000450066 ASB11Q8WXH4 323 aa14□□□□□ -0.17
USP39-207ENST00000450066 HLA-CQ95604 372 aa14□□□□□ -0.17
USP39-207ENST00000450066 ARMCX1Q9P291 453 aa14□□□□□ -0.17
USP39-207ENST00000450066 PTBP2Q9UKA9 531 aaKnown RBP14□□□□□ -0.17
USP39-207ENST00000450066 E2F3O00716 465 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 PPP6CO00743 305 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 NARSO43776 548 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 DNAJC8O75937 253 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 JUNP05412 331 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms