RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 NAF1Q96HR8 494 aaKnown RBP11.7□□□□□ -0.54
LSP1P3-201ENST00000449530 ZNF778Q96MU6 729 aa11.7□□□□□ -0.54
LSP1P3-201ENST00000449530 WWP1Q9H0M0 922 aa11.7□□□□□ -0.54
LSP1P3-201ENST00000449530 WASH6PQ9NQA3 447 aa11.7□□□□□ -0.54
LSP1P3-201ENST00000449530 POT1Q9NUX5 634 aa11.7□□□□□ -0.54
LSP1P3-201ENST00000449530 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
LSP1P3-201ENST00000449530 MAST4O15021 2626 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 URB1O60287 2271 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 IGLV3-16A0A075B6K0 115 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 TCRBV7S3A2A0A539 114 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 RRP8O43159 456 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 PHF2O75151 1096 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 GOT2P00505 430 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 SLC35G4P0C7Q5 338 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 ATP1B2P14415 290 aaPredicted RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 PSMA3P25788 255 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 EIF2S3P41091 472 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 LIMK2P53671 638 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 ERVPABLB-1P60509 514 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 GNG11P61952 73 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 GPR18Q14330 331 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 GSE1Q14687 1217 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 RPE65Q16518 533 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 CYP1B1Q16678 543 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 CCDC137Q6PK04 289 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 ZNF534Q76KX8 674 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 NLRP9Q7RTR0 991 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 LILRA3Q8N6C8 439 aaPredicted RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 CLDN19Q8N6F1 224 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 OR6P1Q8NGX9 317 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 OR2L2Q8NH16 312 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 HNRNPLLQ8WVV9 542 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 JPH3Q8WXH2 748 aaPredicted RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 NCSTNQ92542 709 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 HDAC10Q969S8 669 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 RMDN2Q96LZ7 410 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 SLC46A1Q96NT5 459 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 CMKLR1Q99788 373 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 DPYSL5Q9BPU6 564 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 UCK1Q9HA47 277 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 IMP3Q9NV31 184 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 SYBUQ9NX95 663 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 AKAP7Q9P0M2 348 aaPredicted RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 KLHL3Q9UH77 587 aa11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 CFAP20Q9Y6A4 193 aaKnown RBP11.69□□□□□ -0.54
LSP1P3-201ENST00000449530 CELSR3Q9NYQ7 3312 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 A0A087WV48 116 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 A8MU76 341 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 CDRT15L2A8MXV6 281 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 CES2O00748 559 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 HGSO14964 777 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 POLBP06746 335 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 MTHFD1P11586 935 aaKnown RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 TYRP1P17643 537 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 TCP1P17987 556 aaKnown RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 MGAT1P26572 445 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ITPKBP27987 946 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ETV5P41161 510 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ABCG1P45844 678 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 MAPK10P53779 464 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 GFERP55789 205 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 PRAMEP78395 509 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ACVR1Q04771 509 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 SQSTM1Q13501 440 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ITIH4Q14624 930 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 KCNJ11Q14654 390 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 PLCL1Q15111 1095 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 PCID2Q5JVF3 399 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ANKRD22Q5VYY1 191 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 METRNLQ641Q3 311 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 TMEM71Q6P5X7 295 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 WDR74Q6RFH5 385 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 LRRC69Q6ZNQ3 347 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 CLEC14AQ86T13 490 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 CFAP206Q8IYR0 622 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 ZNF248Q8NDW4 579 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 KCNE4Q8WWG9 221 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 RSC1A1Q92681 617 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 TMEM159Q96B96 161 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 CAPZA3Q96KX2 299 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 LINC00615Q96LM1 132 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 C12orf66Q96MD2 445 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 BBC3Q96PG8 261 aaPredicted RBP11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 IL22Q9GZX6 179 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 EPB41L1Q9H4G0 881 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 COG4Q9H9E3 785 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 VPS37BQ9H9H4 285 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 SLC40A1Q9NP59 571 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 CHRAC1Q9NRG0 131 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 BFARQ9NZS9 450 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 OGFRQ9NZT2 677 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 RIMKLBQ9ULI2 386 aa11.68□□□□□ -0.54
LSP1P3-201ENST00000449530 PRSS21Q9Y6M0 314 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms