RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HSP90B2PQ58FF3 399 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 LAYNQ6UX15 382 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 XKR5Q6UX68 686 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 OTOAQ7RTW8 1153 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 GALNT13Q8IUC8 556 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SPNS2Q8IVW8 549 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 C4orf33Q8N1A6 199 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ALKBH8Q96BT7 664 aaKnown RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 UBXN10Q96LJ8 280 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SMC6Q96SB8 1091 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 TIMM29Q9BSF4 260 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 VPS11Q9H270 941 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 CYP4F12Q9HCS2 524 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ZNHIT2Q9UHR6 403 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 PRKAB1Q9Y478 270 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 MGAT4DA6NG13 374 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 PRR5-ARHGAP8B1AHC4 643 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 H3BQF6 201 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 GMPRP36959 345 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 GNPDA1P46926 289 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 NXPH1P58417 271 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ARHGAP8P85298 464 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 IRF9Q00978 393 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 DMPKQ09013 629 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 TTLL9Q3SXZ7 439 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 PLEKHS1Q5SXH7 462 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 LCA5Q86VQ0 697 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 PARGQ86W56 976 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 CPNE9Q8IYJ1 553 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 CENPLQ8N0S6 344 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 HM13Q8TCT9 377 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ANKRD49Q8WVL7 239 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 OR2M4Q96R27 311 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 LRFN3Q9BTN0 628 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 CARS2Q9HA77 564 aaKnown RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SUSD2Q9UGT4 822 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 CDYLQ9Y232 598 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ATXN2Q99700 1313 aaKnown RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 SLC5A10A0PJK1 596 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 EIF3FO00303 357 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 LIN7AO14910 233 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 GPC4O75487 556 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 TSPAN12O95859 305 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 CBSLP0DN79 551 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 COL6A2P12110 1019 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 GNSP15586 552 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 PBLDP30039 288 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 CBSP35520 551 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 BOP1Q14137 746 aaKnown RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 PLA2G4EQ3MJ16 856 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 NAPRTQ6XQN6 538 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 AMZ2Q86W34 360 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 SPATS2Q86XZ4 545 aaKnown RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 NKAPQ8N5F7 415 aaKnown RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 ASZ1Q8WWH4 475 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 TSACCQ96A04 125 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-203ENST00000449049 SKA1Q96BD8 255 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 COG4Q9H9E3 785 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 TM7SF3Q9NS93 570 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 TMEM74BQ9NUR3 256 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 SLC23A2Q9UGH3 650 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 MOSPD1Q9UJG1 213 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 ABCA7Q8IZY2 2146 aa13.8□□□□□ -0.2
SHMT2-203ENST00000449049 ERICH4A6NGS2 130 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 KCNJ13O60928 360 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 APOA4P06727 396 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 GSTA1P08263 222 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 CCDC166P0CW27 439 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 HOXD12P35452 270 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 DPP6P42658 865 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 CSNK1EP49674 416 aaKnown RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 IL2P60568 153 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 DLG1Q12959 904 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 TEAD4Q15561 434 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 ACSBG2Q5FVE4 666 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 PLD6Q8N2A8 252 aaKnown RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 GLMNQ92990 594 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 PDLIM5Q96HC4 596 aaKnown RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 IGSF5Q9NSI5 407 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 GPSM3Q9Y4H4 160 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 PIKFYVEQ9Y2I7 2098 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 TYROBPO43914 113 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 GLRA3O75311 464 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 KLHL2O95198 593 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 RASGRP1O95267 797 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 LTA4HP09960 611 aaKnown RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 ACP5P13686 325 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 ENO3P13929 434 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 BRAFP15056 766 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms