RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 C6orf136Q5SQH8 315 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 TPGS2Q68CL5 300 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 LRRC66Q68CR7 880 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 SERPINA13PQ6UXR4 307 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 DHFR2Q86XF0 187 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 KCNJ9Q92806 393 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 SCAMP4Q969E2 229 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 LRRC58Q96CX6 371 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 BEGAINQ9BUH8 593 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 IPPKQ9H8X2 491 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 SLC52A3Q9NQ40 469 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 C6orf203Q9P0P8 240 aaPredicted RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 HECAQ9UBI9 543 aaPredicted RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 POLR3HQ9Y535 204 aaPredicted RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.07
SF1-211ENST00000448404 FFAR2O15552 330 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 ZNF26P17031 533 aaPredicted RBP14.58□□□□□ -0.07
SF1-211ENST00000448404 NR6A1Q15406 480 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 CNPY1Q3B7I2 92 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 ATP13A5Q4VNC0 1218 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 ANKRD33Q7Z3H0 272 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 DCAF4L2Q8NA75 395 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 CYB5D2Q8WUJ1 264 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 OVCA2Q8WZ82 227 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 ZNF689Q96CS4 500 aaPredicted RBP14.58□□□□□ -0.07
SF1-211ENST00000448404 TRMT2BQ96GJ1 504 aaKnown RBP14.58□□□□□ -0.07
SF1-211ENST00000448404 PRPF18Q99633 342 aaKnown RBP14.58□□□□□ -0.07
SF1-211ENST00000448404 ZDHHC4Q9NPG8 344 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 ZDHHC7Q9NXF8 308 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 HACD3Q9P035 362 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 DNMT3BQ9UBC3 853 aaKnown RBP14.58□□□□□ -0.07
SF1-211ENST00000448404 RNF11Q9Y3C5 154 aa14.58□□□□□ -0.07
SF1-211ENST00000448404 ARHGAP10A1A4S6 786 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 LEFTY2O00292 366 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 SOCS2O14508 198 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 PTGER3P43115 390 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 NEK2P51955 445 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 ERVFC1P60507 584 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 MYBPC1Q00872 1141 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 MAPRE2Q15555 327 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 ZXDCQ2QGD7 858 aaPredicted RBP14.58□□□□□ -0.08
SF1-211ENST00000448404 C8orf82Q6P1X6 216 aaPredicted RBP14.58□□□□□ -0.08
SF1-211ENST00000448404 CNKSR3Q6P9H4 555 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 BLOC1S3Q6QNY0 202 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 DPY19L3Q6ZPD9 716 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 VRK3Q8IV63 474 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 TCEAL8Q8IYN2 117 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 MRPS31Q92665 395 aaKnown RBP14.58□□□□□ -0.08
SF1-211ENST00000448404 TCF12Q99081 682 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 SEPHS2Q99611 448 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 C2orf49Q9BVC5 232 aaPredicted RBP14.58□□□□□ -0.08
SF1-211ENST00000448404 POPDC3Q9HBV1 291 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 TRIOO75962 3097 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 CROCCQ5TZA2 2017 aa14.58□□□□□ -0.08
SF1-211ENST00000448404 GLYATL1P3A0A0U1RQE8 302 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 SYCE1LA8MT33 242 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 GIPC1O14908 333 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 INPP4BO15327 924 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 GNAO1P09471 354 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 SRCP12931 536 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 RHDQ02161 417 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 HSPA14Q0VDF9 509 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 ARHGEF7Q14155 803 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 INO80DQ53TQ3 878 aaPredicted RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 CRTC1Q6UUV9 634 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 MILR1Q7Z6M3 343 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 TMC8Q8IU68 726 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 TICAM1Q8IUC6 712 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 OR56A4Q8NGH8 313 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 PROKR1Q8TCW9 393 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 ING5Q8WYH8 240 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 NR1H4Q96RI1 486 aaPredicted RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 ACTL8Q9H568 366 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 CXXC1Q9P0U4 656 aaPredicted RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 SUCOQ9UBS9 1254 aaKnown RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 DHRS7Q9Y394 339 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 ZFC3H1O60293 1989 aaKnown RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 GFRA2O00451 464 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 CXCL14O95715 111 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 ESR1P03372 595 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 PPP1R8Q12972 351 aaKnown RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 GTF2H2Q13888 395 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 CDKN3Q16667 212 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 PYCR3Q53H96 274 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 PLPP4Q5VZY2 271 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 GTF2H2CQ6P1K8 395 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 KRTCAP2Q8N6L1 136 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 OR10Q1Q8NGQ4 319 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 GPATCH1Q9BRR8 931 aaKnown RBP14.57□□□□□ -0.08
SF1-211ENST00000448404 PREBQ9HCU5 417 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 EPS15L1Q9UBC2 864 aa14.57□□□□□ -0.08
SF1-211ENST00000448404 LRG1P02750 347 aa14.56□□□□□ -0.08
SF1-211ENST00000448404 SMIM18P0DKX4 95 aa14.56□□□□□ -0.08
SF1-211ENST00000448404 CHN2P52757 468 aa14.56□□□□□ -0.08
SF1-211ENST00000448404 RPL38P63173 70 aaKnown RBP14.56□□□□□ -0.08
SF1-211ENST00000448404 B4GALNT1Q00973 533 aa14.56□□□□□ -0.08
SF1-211ENST00000448404 MESP2Q0VG99 397 aa14.56□□□□□ -0.08
SF1-211ENST00000448404 SAMD4BQ5PRF9 694 aaKnown RBP14.56□□□□□ -0.08
SF1-211ENST00000448404 RETSATQ6NUM9 610 aa14.56□□□□□ -0.08
SF1-211ENST00000448404 GRIP2Q9C0E4 1043 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms