RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 COL25A1Q9BXS0 654 aaPredicted RBP19.2■□□□□ 0.66
SGCE-207ENST00000447873 FGF22Q9HCT0 170 aa19.2■□□□□ 0.66
SGCE-207ENST00000447873 MRPL40Q9NQ50 206 aaKnown RBP19.2■□□□□ 0.66
SGCE-207ENST00000447873 FAM8A1Q9UBU6 413 aa19.2■□□□□ 0.66
SGCE-207ENST00000447873 KLQ9UEF7 1012 aa19.2■□□□□ 0.66
SGCE-207ENST00000447873 SUFUQ9UMX1 484 aa19.2■□□□□ 0.66
SGCE-207ENST00000447873 PCYT1BQ9Y5K3 369 aaPredicted RBP19.2■□□□□ 0.66
SGCE-207ENST00000447873 SPAG17Q6Q759 2223 aa19.2■□□□□ 0.66
SGCE-207ENST00000447873 TMEM120BA0PK00 339 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 PRSS38A1L453 326 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 TNFRSF10CO14798 259 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 FUCA1P04066 466 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 RPA3P35244 121 aaPredicted RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 RGS4P49798 205 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 INSCQ1MX18 579 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 FAM83EQ2M2I3 478 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 SYTL3Q4VX76 610 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 LYSMD4Q5XG99 296 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 PMS2CLQ68D20 193 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 CEP68Q76N32 757 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 AMZ2Q86W34 360 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 TCP10LQ8TDR4 215 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 EEF1AKMT1Q8WVE0 214 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 ASZ1Q8WWH4 475 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 CYP4F12Q9HCS2 524 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 TM9SF3Q9HD45 589 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 GRID1Q9ULK0 1009 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 RUVBL2Q9Y230 463 aaKnown RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 DNMT3AQ9Y6K1 912 aaPredicted RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 C17orf113A0A1B0GUU1 675 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 MGAT4DA6NG13 374 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 GNPDA1P46926 289 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 PPARDQ03181 441 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 OVGP1Q12889 678 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 SEPT7Q16181 437 aaKnown RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 TSNAXIP1Q2TAA8 658 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 PLK5Q496M5 336 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 PYCR3Q53H96 274 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 ACSBG2Q5FVE4 666 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 PLEKHS1Q5SXH7 462 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 AGAP9Q5VTM2 703 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 KLC3Q6P597 504 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 CHST15Q7LFX5 561 aaPredicted RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 MTERF4Q7Z6M4 381 aaKnown RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 C11orf96Q7Z7L8 435 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 IQCHQ86VS3 1027 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 DCP2Q8IU60 420 aaKnown RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 OR2L2Q8NH16 312 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 C1orf216Q8TAB5 229 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 TMEM159Q96B96 161 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 NXNL1Q96CM4 212 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 LINGO1Q96FE5 620 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 SCARF2Q96GP6 870 aaPredicted RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 UNKQ9C0B0 810 aaKnown RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 CARS2Q9HA77 564 aaKnown RBP19.19■□□□□ 0.66
SGCE-207ENST00000447873 GPR27Q9NS67 375 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 TM7SF3Q9NS93 570 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 IGSF5Q9NSI5 407 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 ZNF358Q9NW07 568 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 GPSM3Q9Y4H4 160 aa19.19■□□□□ 0.66
SGCE-207ENST00000447873 SDK1Q7Z5N4 2213 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 SPTY2D1-AS1A0A0U1RR47 76 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 A0A1W2PR77 199 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 PRR33A8MZF0 331 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 LIN7AO14910 233 aaPredicted RBP19.18■□□□□ 0.66
SGCE-207ENST00000447873 ZWINTO95229 277 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 CBSLP0DN79 551 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 ITPKAP23677 461 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 CBSP35520 551 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 GLRBP48167 497 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 KPNA2P52292 529 aaKnown RBP19.18■□□□□ 0.66
SGCE-207ENST00000447873 DLG1Q12959 904 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 N4BP2L1Q5TBK1 243 aaPredicted RBP19.18■□□□□ 0.66
SGCE-207ENST00000447873 RD3Q7Z3Z2 195 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 CFAP206Q8IYR0 622 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 OXR1Q8N573 874 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 ARFGAP2Q8N6H7 521 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 ANKRD42Q8N9B4 389 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 OR1E3Q8WZA6 343 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 TSACCQ96A04 125 aaPredicted RBP19.18■□□□□ 0.66
SGCE-207ENST00000447873 PDXPQ96GD0 296 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 DERL2Q9GZP9 239 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 NMRAL1Q9HBL8 299 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 NKIRAS1Q9NYS0 192 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 TSR3Q9UJK0 312 aaKnown RBP19.18■□□□□ 0.66
SGCE-207ENST00000447873 PLLPQ9Y342 182 aa19.18■□□□□ 0.66
SGCE-207ENST00000447873 KLHL33A6NCF5 533 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 TM9SF1O15321 606 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 BCAT2O15382 392 aaPredicted RBP19.17■□□□□ 0.66
SGCE-207ENST00000447873 TSPAN12O95859 305 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 WNT1P04628 370 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 ENO3P13929 434 aaPredicted RBP19.17■□□□□ 0.66
SGCE-207ENST00000447873 CD1DP15813 335 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 SLC18A1P54219 525 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 SRP54P61011 504 aaKnown RBP19.17■□□□□ 0.66
SGCE-207ENST00000447873 ATP6V0D1P61421 351 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 MPP2Q14168 576 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 C16orf46Q6P387 395 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 MYO1HQ8N1T3 1032 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms