RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PNLIPP16233 465 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 CSF2RBP32927 897 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 SLC19A1P41440 591 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 PREPP48147 710 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 TTPAP49638 278 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 PDX1P52945 283 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 CSE1LP55060 971 aaKnown RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 UBE2IP63279 158 aaKnown RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 MORF4L2Q15014 288 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 ISXQ2M1V0 245 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 ANKRD20A4Q4UJ75 823 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 SYTL3Q4VX76 610 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 AGAP9Q5VTM2 703 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 HIBCHQ6NVY1 386 aaPredicted RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 FOXR1Q6PIV2 292 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 ABRAXAS1Q6UWZ7 409 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 UNQ6494/PRO21346Q6UXR6 183 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 PACS1Q6VY07 963 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 CERS6Q6ZMG9 384 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 USP53Q70EK8 1073 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 TMPRSS9Q7Z410 1059 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 HM13Q8TCT9 377 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 LKAAEAR1Q8TD35 194 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 ELMO1Q92556 727 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 CFAP36Q96G28 342 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 AHCYL2Q96HN2 611 aaKnown RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 SIGLEC10Q96LC7 697 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 LINC00615Q96LM1 132 aaPredicted RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 RMDN2Q96LZ7 410 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 C12orf66Q96MD2 445 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 NUDT22Q9BRQ3 303 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 CCM2Q9BSQ5 444 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 TBC1D10AQ9BXI6 508 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 COG4Q9H9E3 785 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 EPB41L5Q9HCM4 733 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 CHMP2BQ9UQN3 213 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 DNMT3AQ9Y6K1 912 aaPredicted RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 TPRP12270 2363 aaKnown RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 IGHV1OR21-1A0A087WYE8 117 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 FAM187AA6NFU0 413 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 IQCF5A8MTL0 148 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 NTN3O00634 580 aaPredicted RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 KCNJ13O60928 360 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 NDUFS3O75489 264 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 TCEA3O75764 348 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 AP2A2O94973 939 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 FTH1P02794 183 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 OR56A5P0C7T3 313 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 PGAM1P18669 254 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 MPSTP25325 297 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 PPARGP37231 505 aaPredicted RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 THOC5Q13769 683 aaKnown RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 GPR18Q14330 331 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 NR1D2Q14995 579 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 RPE65Q16518 533 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 HIF1AQ16665 826 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 DNAJC21Q5F1R6 531 aaKnown RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 C3orf38Q5JPI3 329 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 PHF19Q5T6S3 580 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 METRNLQ641Q3 311 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 ZNF470Q6ECI4 717 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 MRNIPQ6NTE8 343 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 ZNF572Q7Z3I7 529 aaPredicted RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 MAATS1Q7Z4T9 603 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 UNC5BQ8IZJ1 945 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 PDIK1LQ8N165 341 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 KRT222Q8N1A0 295 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 WDR48Q8TAF3 677 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 GATA6Q92908 595 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 CNTNAP3BQ96NU0 1288 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 CNTNAP3Q9BZ76 1288 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 C20orf96Q9NUD7 363 aaPredicted RBP11.67□□□□□ -0.54
RFC4-208ENST00000447345 POT1Q9NUX5 634 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 TMEM9Q9P0T7 183 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 ENTPD2Q9Y5L3 495 aa11.67□□□□□ -0.54
RFC4-208ENST00000447345 SNRNP200O75643 2136 aaKnown RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 ZCWPW2A0A1B0GU75 182 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 MAGEB16A2A368 324 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 PMS2P1A4D2B8 440 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 FAM221BA6H8Z2 402 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 TRABD2BA6NFA1 517 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 QSOX1O00391 747 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 ZW10O43264 779 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 DUX1O43812 170 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 USP1O94782 785 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 CPNE6O95741 557 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 MPOP05164 745 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 TYRP1P17643 537 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 XRCC1P18887 633 aaPredicted RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 CD1CP29017 333 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 PDHA2P29803 388 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms