RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 RIMKLBQ9ULI2 386 aa11.31□□□□□ -0.6
GNE-203ENST00000447283 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
GNE-203ENST00000447283 CHD9Q3L8U1 2897 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 SLC12A8A0AV02 714 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 PER2O15055 1255 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 RPP40O75818 363 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 CPNE6O95741 557 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 F11P03951 625 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 RPS17P08708 135 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 INHBBP09529 407 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 HTR1EP28566 365 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 EEF1DP29692 281 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 TYSND1Q2T9J0 566 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 XKR7Q5GH72 579 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 CCNYL2Q5T2Q4 361 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 GPR107Q5VW38 600 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 KCTD8Q6ZWB6 473 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 EFL1Q7Z2Z2 1120 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 TFAP2DQ7Z6R9 452 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 RBM23Q86U06 439 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 OFCC1Q8IZS5 231 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 PGBD5Q8N414 524 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 DNAJB14Q8TBM8 379 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TBC1D15Q8TC07 691 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 OSCP1Q8WVF1 389 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 ZNF599Q96NL3 588 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 SLC30A3Q99726 388 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 DERL2Q9GZP9 239 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 LMAN2LQ9H0V9 348 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
GNE-203ENST00000447283 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 CDH23Q9H251 3354 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 GREB1Q4ZG55 1949 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 IGLV3-10A0A075B6K4 115 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 CBFA2T3O75081 653 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 NPPAP01160 153 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 FGF1P05230 155 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 ETFBP38117 255 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 STC1P52823 247 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 PDCD4Q53EL6 469 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 AARS2Q5JTZ9 985 aaKnown RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 PAGE3Q5JUK9 113 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 ACBD5Q5T8D3 534 aaPredicted RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TMEM150AQ86TG1 271 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 PROSER1Q86XN7 944 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 KIAA2013Q8IYS2 634 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 FBXO39Q8N4B4 442 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 MAGEE2Q8TD90 523 aaPredicted RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 SLC22A17Q8WUG5 538 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 VPS50Q96JG6 964 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TEX37Q96LM6 180 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 TRIM8Q9BZR9 551 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 SYTL2Q9HCH5 934 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 ZNF334Q9HCZ1 680 aaPredicted RBP11.3□□□□□ -0.6
GNE-203ENST00000447283 CATSPERZQ9NTU4 200 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 ANKRD12Q6UB98 2062 aa11.3□□□□□ -0.6
GNE-203ENST00000447283 A0A1W2PPW3 197 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 SUPT3HB4E1H0 165 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 COCHO43405 550 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 SUPT3HO75486 399 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 SLC22A3O75751 556 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 SNAP29O95721 258 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 EPOP01588 193 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 ENO2P09104 434 aaPredicted RBP11.29□□□□□ -0.6
GNE-203ENST00000447283 NCK1P16333 377 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 EPCAMP16422 314 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 JUNBP17275 347 aaPredicted RBP11.29□□□□□ -0.6
GNE-203ENST00000447283 HRH2P25021 359 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 GABRR2P28476 465 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 RING1Q06587 406 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 CBX2Q14781 532 aaPredicted RBP11.29□□□□□ -0.6
GNE-203ENST00000447283 ALFQ53S48 1182 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 MS4A13Q5J8X5 152 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 OR4L1Q8NH43 312 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
GNE-203ENST00000447283 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 SEMA4BQ9NPR2 832 aaPredicted RBP11.29□□□□□ -0.6
GNE-203ENST00000447283 ZIM2Q9NZV7 527 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
GNE-203ENST00000447283 ARL5AQ9Y689 179 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms