RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 BIRC2Q13490 618 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 SQSTM1Q13501 440 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 NR1D2Q14995 579 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 KYAT1Q16773 422 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 FCRL6Q6DN72 434 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 LCN10Q6JVE6 187 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 ERN2Q76MJ5 926 aaKnown RBP4.9□□□□□ -1.63
SDCBP-205ENST00000447267 WDR49Q8IV35 697 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 OR1N1Q8NGS0 311 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 FIBINQ8TAL6 211 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 NCSTNQ92542 709 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 PDXPQ96GD0 296 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 OR6C1Q96RD1 312 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 BRD8Q9H0E9 1235 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 SNX25Q9H3E2 840 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 COMMD8Q9NX08 183 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 SIDT1Q9NXL6 827 aaKnown RBP4.9□□□□□ -1.63
SDCBP-205ENST00000447267 PLA2G3Q9NZ20 509 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 SFMBT1Q9UHJ3 866 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 SIX4Q9UIU6 781 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 KIF3AQ9Y496 699 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 ASB1Q9Y576 335 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 CACNA1CQ13936 2221 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 LRP4O75096 1905 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 ANKRD63C9JTQ0 380 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 MCF2LO15068 1137 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 TNFP01375 233 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 UNGP13051 313 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 DLX5P56178 289 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 YPEL5P62699 121 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 RPS24P62847 133 aaKnown RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 DLG2Q15700 870 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 EARS2Q5JPH6 523 aaKnown RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 PIK3R6Q5UE93 754 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 SLC39A4Q6P5W5 647 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 C17orf82Q86X59 251 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 CCDC117Q8IWD4 279 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 FAM186BQ8IYM0 893 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 CFAP52Q8N1V2 620 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 CHST14Q8NCH0 376 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 HIPK4Q8NE63 616 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 ZSWIM2Q8NEG5 633 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 OR1E3Q8WZA6 343 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 AHCYL2Q96HN2 611 aaKnown RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 AGAP3Q96P47 875 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 SLC26A6Q9BXS9 759 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 IKZF4Q9H2S9 585 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 FBXO44Q9H4M3 255 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 SUDS3Q9H7L9 328 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 DMAP1Q9NPF5 467 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 ANLNQ9NQW6 1124 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 SH3GLB2Q9NR46 395 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 BEX4Q9NWD9 120 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 KLQ9UEF7 1012 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 SCML2Q9UQR0 700 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 ITM2BQ9Y287 266 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 FADS3Q9Y5Q0 445 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 RBM8AQ9Y5S9 174 aaKnown RBP4.89□□□□□ -1.63
SDCBP-205ENST00000447267 CYP46A1Q9Y6A2 500 aa4.89□□□□□ -1.63
SDCBP-205ENST00000447267 KLF18A0A0U1RQI7 1052 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 ADAM10O14672 748 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 ZW10O43264 779 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 SLC26A4O43511 780 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 PTMAP06454 111 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 RALAP11233 206 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 IL4RP24394 825 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 CHRNA3P32297 505 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 KRT9P35527 623 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 RPS19P39019 145 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 NNMTP40261 264 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 GPR3P46089 330 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 RCAN1P53805 252 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 NR1H2P55055 460 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 RBP5P82980 135 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 IRF9Q00978 393 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 AKAP17AQ02040 695 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 ALDH6A1Q02252 535 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 RBPJQ06330 500 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 FHL2Q14192 279 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 LSM12Q3MHD2 195 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 ZC3H12BQ5HYM0 836 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 KIAA1161Q6NSJ0 714 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 CPSF7Q8N684 471 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 LRRC52Q8N7C0 313 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 ENDOVQ8N8Q3 282 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 B3GALNT2Q8NCR0 500 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 PPP4R1Q8TF05 950 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 SHC3Q92529 594 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 ERCC4Q92889 916 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 MR1Q95460 341 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 HPDLQ96IR7 371 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 GBP5Q96PP8 586 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 SRPK1Q96SB4 655 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 NTPCRQ9BSD7 190 aaKnown RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 CHST8Q9H2A9 424 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 TUFT1Q9NNX1 390 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 KCNJ16Q9NPI9 418 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 DMRT3Q9NQL9 472 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 DYRK4Q9NR20 520 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 SNX7Q9UNH6 387 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms