RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PAK1IP1Q9NWT1 392 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 SMPD3Q9NY59 655 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 GPSM3Q9Y4H4 160 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 A0A1W2PQH9 124 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 TCAF2A6NFQ2 919 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PIK3R2O00459 728 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 HDAC3O15379 428 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 ECI2O75521 394 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CCNKO75909 580 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 GABARAPO95166 117 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 KCNH1O95259 989 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 USP17L7P0C7H9 530 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 DDX6P26196 483 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX56-206ENST00000446987 RPL10P27635 214 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 EIF2DP41214 584 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 DAOAP59103 153 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 NOMO3P69849 1222 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 ADARB1P78563 741 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 AQP6Q13520 282 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 BMPR2Q13873 1038 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SMU1Q2TAY7 513 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SPATS1Q496A3 300 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PTPN20Q4JDL3 420 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 ARHGAP15Q53QZ3 475 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 HFE2Q6ZVN8 426 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 LURAP1LQ8IV03 231 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 LYSMD2Q8IV50 215 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SLC44A3Q8N4M1 653 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 OR6F1Q8NGZ6 308 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CPA5Q8WXQ8 436 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PPWD1Q96BP3 646 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 CPXM1Q96SM3 734 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 LHX5Q9H2C1 402 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 TM9SF3Q9HD45 589 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 C12orf4Q9NQ89 552 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SYBUQ9NX95 663 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 TRPM5Q9NZQ8 1165 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SEPT10Q9P0V9 454 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PAK5Q9P286 719 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 TXNDC16Q9P2K2 825 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 TNFRSF10DQ9UBN6 386 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 MID2Q9UJV3 735 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CAB39Q9Y376 341 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 APOC4-APOC2K7ER74 178 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 COCHO43405 550 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 MED7O43513 233 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 DAB1O75553 588 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 HSPA4LO95757 839 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 NDST3O95803 873 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 APOC2P02655 101 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 DDX5P17844 614 aaKnown RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 TCN1P20061 433 aaPredicted RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 RBL1P28749 1068 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 ARRB2P32121 409 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 DDOSTP39656 456 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 NKX2-5P52952 324 aaPredicted RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 CTF1Q16619 201 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 IER5LQ5T953 404 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 UBE2UQ5VVX9 321 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 ATG14Q6ZNE5 492 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 EPHX4Q8IUS5 362 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 LILRB1Q8NHL6 650 aaPredicted RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 GABPB2Q8TAK5 448 aaPredicted RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 JPH3Q8WXH2 748 aaPredicted RBP12.92□□□□□ -0.34
DDX56-206ENST00000446987 MUL1Q969V5 352 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 ELSPBP1Q96BH3 223 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 ASIC4Q96FT7 647 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 HSFY1Q96LI6 401 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 UBXN10Q96LJ8 280 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 OR52B2Q96RD2 323 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 SMYD2Q9NRG4 433 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 RAP2CQ9Y3L5 183 aa12.92□□□□□ -0.34
DDX56-206ENST00000446987 YJEFN3A6XGL0 299 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 CENPXA8MT69 81 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 H7C0C1 242 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ARNTLO00327 626 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 RAD51BO15315 384 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 KCNK2O95069 426 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 PRKCGP05129 697 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 KRT7P08729 469 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 KCNA4P22459 653 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 POLR2IP36954 125 aaKnown RBP12.91□□□□□ -0.34
DDX56-206ENST00000446987 MAGEA3P43357 314 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 PTPN9P43378 593 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 PPP3CCP48454 512 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 PRIM2P49643 509 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 B2MP61769 119 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 BNC1Q01954 994 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 TOP3AQ13472 1001 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms